RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 AGTR2P50052 363 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 HTR6P50406 440 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 MIDNQ504T8 468 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 COBLL1Q53SF7 1204 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 SLC25A28Q96A46 364 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 LYZL4Q96KX0 146 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 TBCBQ99426 244 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 STARD7Q9NQZ5 370 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 MSRB1Q9NZV6 116 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 COG5Q9UP83 839 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 MAN2B2Q9Y2E5 1009 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 CFAP74Q9C0B2 1584 aa5.79□□□□□ -1.48
PRPF39-209ENST00000556353 NEO1Q92859 1461 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ARHGAP35Q9NRY4 1499 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 HECW1Q76N89 1606 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 TRBV5-3A0A0A0MS03 114 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ZNF814B7Z6K7 855 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 PRPF4O43172 522 aaKnown RBP eCLIP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 CTIFO43310 598 aaKnown RBP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 PCF11O94913 1555 aaKnown RBP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 NDUFB8O95169 186 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 NDST3O95803 873 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 PECAM1P16284 738 aaPredicted RBP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 STAT6P42226 847 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 NSUN2Q08J23 767 aaKnown RBP eCLIP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 EEA1Q15075 1411 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 SAFBQ15424 915 aaKnown RBP eCLIP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ARL13BQ3SXY8 428 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 KLHL22Q53GT1 634 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ARHGAP15Q53QZ3 475 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 PIK3AP1Q6ZUJ8 805 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 TXLNBQ8N3L3 684 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 GLMPQ8WWB7 406 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ASB12Q8WXK4 309 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 SARGQ9BW04 601 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ERVK-5Q9HDB9 667 aa5.78□□□□□ -1.48
PRPF39-209ENST00000556353 AGO2Q9UKV8 859 aaKnown RBP5.78□□□□□ -1.48
PRPF39-209ENST00000556353 ZNF335Q9H4Z2 1342 aaPredicted RBP5.77□□□□□ -1.49
PRPF39-209ENST00000556353 CDC42BPAQ5VT25 1732 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 ZC3H11AO75152 810 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRPF39-209ENST00000556353 FGF2P09038 288 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 SRGAP2BP0DMP2 458 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 AKR1A1P14550 325 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 DMWDQ09019 674 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 CBFBQ13951 182 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 PRTGQ2VWP7 1150 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 ANXA2RQ3ZCQ2 193 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 KIAA1161Q6NSJ0 714 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 ZNF549Q6P9A3 640 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 RFX8Q6ZV50 586 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 KRT27Q7Z3Y8 459 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 TTC30AQ86WT1 665 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 RHPN2Q8IUC4 686 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 LAS2Q8IYD9 372 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 ADAMTS15Q8TE58 950 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRPF39-209ENST00000556353 RGL1Q9NZL6 768 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 PCDHA12Q9UN75 941 aa5.77□□□□□ -1.49
PRPF39-209ENST00000556353 EPN2O95208 641 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 SGPL1O95470 568 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 NANOS2P60321 138 aaKnown RBP5.76□□□□□ -1.49
PRPF39-209ENST00000556353 SEMA3AQ14563 771 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 DLGAP5Q15398 846 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 INPP5JQ15735 1006 aaPredicted RBP5.76□□□□□ -1.49
PRPF39-209ENST00000556353 MAPKAPK3Q16644 382 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 LIPMQ5VYY2 423 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 B4GALNT4Q76KP1 1039 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 CCAR1Q8IX12 1150 aaKnown RBP5.76□□□□□ -1.49
PRPF39-209ENST00000556353 PELI3Q8N2H9 469 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 ARL14EPQ8N8R7 260 aaPredicted RBP5.76□□□□□ -1.49
PRPF39-209ENST00000556353 GLIS1Q8NBF1 620 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 ZFPM2Q8WW38 1151 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 HTATIP2Q9BUP3 242 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 ELOVL1Q9BW60 279 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 MLXIPQ9HAP2 919 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 THSD1Q9NS62 852 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 FBXO28Q9NVF7 368 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 PREX2Q70Z35 1606 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 PTPRMP28827 1452 aa5.76□□□□□ -1.49
PRPF39-209ENST00000556353 ITSN2Q9NZM3 1697 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 ABCA6Q8N139 1617 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 KIR2DS5A0A0G2JLQ3 304 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 TMEM272A0A1B0GTI8 110 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 KIR2DS3K7RE56 304 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 PMM2O15305 246 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 HIBCHQ6NVY1 386 aaPredicted RBP5.75□□□□□ -1.49
PRPF39-209ENST00000556353 MEPCEQ7L2J0 689 aaKnown RBP5.75□□□□□ -1.49
PRPF39-209ENST00000556353 RASGRP3Q8IV61 690 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 WASF1Q92558 559 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 GDF15Q99988 308 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 PIMREGQ9BSJ6 248 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 UBE2J1Q9Y385 318 aaPredicted RBP5.75□□□□□ -1.49
PRPF39-209ENST00000556353 FANCAO15360 1455 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 LMTK3Q96Q04 1460 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 KDM5CP41229 1560 aa5.75□□□□□ -1.49
PRPF39-209ENST00000556353 YEATS2Q9ULM3 1422 aa5.74□□□□□ -1.49
PRPF39-209ENST00000556353 ZFYVE16Q7Z3T8 1539 aa5.74□□□□□ -1.49
PRPF39-209ENST00000556353 A0A1W2PPC1 479 aa5.74□□□□□ -1.49
PRPF39-209ENST00000556353 FAM234BA2RU67 622 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms