RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 WDR24Q96S15 920 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 DDX50Q9BQ39 737 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 SNRNP25Q9BV90 132 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 PHF7Q9BWX1 381 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 TLR10Q9BXR5 811 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 SMG9Q9H0W8 520 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 ZFP14Q9HCL3 533 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 TBC1D14Q9P2M4 693 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 STOML2Q9UJZ1 356 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 AGO1Q9UL18 857 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 AP4E1Q9UPM8 1137 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 CCL26Q9Y258 94 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 NR2E1Q9Y466 385 aa10.4□□□□□ -0.74
MTHFD1-213ENST00000556284 ANAPC1Q9H1A4 1944 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 CTAGE9A4FU28 777 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 I6L893 689 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 SLC9A3R1O14745 358 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ZNF500O60304 480 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ZRANB2O95218 330 aaKnown RBP eCLIP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 MOCS2O96007 188 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 IRF1P10914 325 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 L1CAMP32004 1257 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 HTR7P34969 479 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 GJC1P36383 396 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 CETN2P41208 172 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 HCAR3P49019 387 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ARSEP51690 589 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 USP4Q13107 963 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 SMTNL2Q2TAL5 461 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ATP13A4Q4VNC1 1196 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 MS4A13Q5J8X5 152 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 KCNT1Q5JUK3 1230 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ZFYVE27Q5T4F4 411 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 KCTD6Q8NC69 237 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 EXD1Q8NHP7 514 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 HSPH1Q92598 858 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 KRT35Q92764 455 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 WBP2Q969T9 261 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ELSPBP1Q96BH3 223 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 OTUB2Q96DC9 234 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 RBM41Q96IZ5 413 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 C16orf45Q96MC5 204 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 DHX35Q9H5Z1 703 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 ANLNQ9NQW6 1124 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 RCOR3Q9P2K3 495 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 OR12D3Q9UGF7 316 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 DNAI1Q9UI46 699 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 PACSIN2Q9UNF0 486 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 HS3ST4Q9Y661 456 aa10.39□□□□□ -0.75
MTHFD1-213ENST00000556284 C2orf16Q68DN1 1984 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 HEPACAM2A8MVW5 462 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 ZNF487B1APH4 448 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 ENC1O14682 589 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 ECI2O75521 394 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PRLRP16471 622 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 TACR2P21452 398 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 FCARP24071 287 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 KDELR1P24390 212 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CASQ1P31415 396 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CHKAP35790 457 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 VIPR2P41587 438 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CDH6P55285 790 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 SEMA3BQ13214 749 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 AUHQ13825 339 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 KRT81Q14533 505 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CA9Q16790 459 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 AAK1Q2M2I8 961 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 FAM133BQ5BKY9 247 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PIK3R6Q5UE93 754 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PAPD7Q5XG87 772 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 TANGO2Q6ICL3 276 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 LRRC31Q6UY01 552 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 SYT10Q6XYQ8 523 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 MFSD6LQ8IWD5 586 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 FAM217AQ8IXS0 508 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 ZDHHC14Q8IZN3 488 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CPXM2Q8N436 756 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 TDRD5Q8NAT2 981 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 BPIFB1Q8TDL5 484 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 RAPGEF5Q92565 580 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 ALG3Q92685 438 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 NXPE3Q969Y0 559 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 RSPRY1Q96DX4 576 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PRMT1Q99873 361 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 SIK2Q9H0K1 926 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 CARD9Q9H257 536 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 RETREG1Q9H6L5 497 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
MTHFD1-213ENST00000556284 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms