RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 GAREM1Q9H706 876 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 SMYD3Q9H7B4 428 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 IL21RQ9HBE5 538 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 CD248Q9HCU0 757 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 TM7SF3Q9NS93 570 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 GOLGA6AQ9NYA3 693 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 WDR35Q9P2L0 1181 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF69Q9UC07 566 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 FBXO2Q9UK22 296 aaPredicted RBP6.14□□□□□ -1.43
PRKCH-220ENST00000556164 LSM7Q9UK45 103 aaKnown RBP6.14□□□□□ -1.43
PRKCH-220ENST00000556164 PCOLCE2Q9UKZ9 415 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 PPT2Q9UMR5 302 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 USP3Q9Y6I4 520 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 MYLKQ15746 1914 aa6.14□□□□□ -1.43
PRKCH-220ENST00000556164 LAMA5O15230 3695 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 KNTC1P50748 2209 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TGFBR3LH3BV60 316 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 GFRA2O00451 464 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CLIC2O15247 247 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 BCAT2O15382 392 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 AKAP10O43572 662 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CBFA2T3O75081 653 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CILPO75339 1184 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CD2BP2O95400 341 aaKnown RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TBX18O95935 607 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 FAM163BP0C2L3 166 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ZDHHC11BP0C7U3 371 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CCDC130P13994 396 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 MATKP42679 507 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PGFP49763 221 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 LIG3P49916 1009 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CDH8P55286 799 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CYP24A1Q07973 514 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CYP4F3Q08477 520 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CAMK2GQ13555 558 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PSMD6Q15008 389 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TLR1Q15399 786 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 FUT11Q495W5 492 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CCDC157Q569K6 752 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 DCAF12L1Q5VU92 463 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 IL27RAQ6UWB1 636 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 HTR3DQ70Z44 454 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 VASH1Q7L8A9 365 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 GLRX5Q86SX6 157 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ACOT1Q86TX2 421 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 CACUL1Q86Y37 369 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 MARCH9Q86YJ5 346 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PDILTQ8N807 584 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 C19orf47Q8N9M1 422 aaKnown RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 GOLM1Q8NBJ4 401 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 DNASE2BQ8WZ79 361 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 SNX19Q92543 992 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PMEPA1Q969W9 287 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 SYAP1Q96A49 352 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 JAKMIP2Q96AA8 810 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TRIM56Q9BRZ2 755 aaKnown RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 KLF16Q9BXK1 252 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ASPSCR1Q9BZE9 553 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 FBXO44Q9H4M3 255 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ZFYVE1Q9HBF4 777 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 TLR8Q9NR97 1041 aaKnown RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 COMMD8Q9NX08 183 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 WSB2Q9NYS7 404 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PLK2Q9NYY3 685 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 MARK1Q9P0L2 795 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF232Q9UNY5 417 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 NFE2L3Q9Y4A8 694 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 SRPRBQ9Y5M8 271 aaKnown RBP6.13□□□□□ -1.43
PRKCH-220ENST00000556164 HRH3Q9Y5N1 445 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 STON1Q9Y6Q2 735 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 PLXNA2O75051 1894 aa6.13□□□□□ -1.43
PRKCH-220ENST00000556164 A0A1B0GVT2 93 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 FAM92AA1XBS5 289 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 FAM149AA5PLN7 773 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 KCNJ18B7U540 433 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 MUC22E2RYF6 1773 aaPredicted RBP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 MDM4O15151 490 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 EIF3DO15371 548 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 FLRT2O43155 660 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 CYP26A1O43174 497 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 SYNCRIPO60506 623 aaKnown RBP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 BEST1O76090 585 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 PF4P02776 101 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 CISD3P0C7P0 127 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 ATXN1LP0C7T5 689 aaKnown RBP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF883P0CG24 379 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 ACADMP11310 421 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 VARSP26640 1264 aaKnown RBP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 OXTRP30559 389 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 ATICP31939 592 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 HOXD13P35453 343 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 ATP5C1P36542 298 aaKnown RBP6.12□□□□□ -1.43
PRKCH-220ENST00000556164 IL12RB1P42701 662 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 TPMTP51580 245 aa6.12□□□□□ -1.43
PRKCH-220ENST00000556164 MAP3K7CLP57077 242 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms