RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PFDN4Q9NQP4 134 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 XPNPEP1Q9NQW7 623 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 MAP3K20Q9NYL2 800 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 PCDHA10Q9Y5I2 948 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PCDHAC2Q9Y5I4 1007 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CNTNAP2Q9UHC6 1331 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TBC1D12O60347 775 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 SERPINB7O75635 380 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ATG7O95352 703 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 HSPA4LO95757 839 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ICAM1P05362 532 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PFKPQ01813 784 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 NIPAL4Q0D2K0 466 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 GRM1Q13255 1194 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PDK1Q15118 436 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PDK2Q15119 407 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ZNF829Q3KNS6 432 aaPredicted RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 DENND1BQ6P3S1 775 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ZNF534Q76KX8 674 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 GPR141Q7Z602 305 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 CPSF7Q8N684 471 aaKnown RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 TFAP2BQ92481 460 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 RNF157Q96PX1 679 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 MSTO1Q9BUK6 570 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 POLR3FQ9H1D9 316 aaPredicted RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 VPS33BQ9H267 617 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 CLK4Q9HAZ1 481 aaKnown RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 INIPQ9NRY2 104 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 CCPG1Q9ULG6 757 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 SLC8A2Q9UPR5 921 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TRIM64CA6NLI5 447 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 G3V3G9 751 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ACOT8O14734 319 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TADA2AO75478 443 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TOMM70O94826 608 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PRKCGP05129 697 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 RBL1P28749 1068 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ARRB2P32121 409 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 STT3AP46977 705 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 SOX10P56693 466 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 MMRN1Q13201 1228 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 CEACAM7Q14002 265 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TAF5Q15542 800 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 DOK7Q18PE1 504 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 MGAT5BQ3V5L5 792 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ZBED5Q49AG3 693 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 KCTD21Q4G0X4 260 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 SLC9B1Q4ZJI4 515 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 DCAF8Q5TAQ9 597 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ATG14Q6ZNE5 492 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 GPR180Q86V85 440 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 WDR49Q8IV35 697 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 CDKL3Q8IVW4 592 aaPredicted RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 PLD5Q8N7P1 536 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TERB1Q8NA31 727 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TOP1MTQ969P6 601 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 TMIGD2Q96BF3 282 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 ABHD8Q96I13 439 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 HNRNPABQ99729 332 aaKnown RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 ZNF341Q9BYN7 854 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 PALMDQ9NP74 551 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.98□□□□□ -1.13
CHD8-209ENST00000555935 PTBP2Q9UKA9 531 aaKnown RBP7.98□□□□□ -1.13
CHD8-209ENST00000555935 TMED5Q9Y3A6 229 aa7.98□□□□□ -1.13
CHD8-209ENST00000555935 A0A087WXM4 84 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 KPNA7A9QM74 516 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 APOL1O14791 398 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 XPO1O14980 1071 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 BAIAP3O94812 1187 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ALDH2P05091 517 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 PDGFRBP09619 1106 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 MLNP12872 115 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 TTKP33981 857 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 SERPINB5P36952 375 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 GARSP41250 739 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 ZNF143P52747 638 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 IKBKEQ14164 716 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 EMC1Q8N766 993 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ADAMTS16Q8TE57 1224 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 ISOC1Q96CN7 298 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 MCRS1Q96EZ8 462 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 SLC4A5Q9BY07 1137 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ANKRD60Q9BZ19 345 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 HIPK3Q9H422 1215 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 CAAP1Q9H8G2 361 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 LIN28AQ9H9Z2 209 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 WDR41Q9HAD4 459 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 OLAHQ9NV23 265 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 HACD3Q9P035 362 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ADGRA2Q96PE1 1338 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 C7orf72A4D263 438 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms