RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 H0Y626 953 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 TRIM16O95361 564 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 CALCAP01258 141 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 AFPP02771 609 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 ATP5BP06576 529 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 DLDP09622 509 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 ZBTB16Q05516 673 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 MBLAC2Q68D91 279 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 NAXDQ8IW45 347 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 EHBP1Q8NDI1 1231 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 DQX1Q8TE96 717 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 FCRL2Q96LA5 508 aaPredicted RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 DDX50Q9BQ39 737 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 TRIM62Q9BVG3 475 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 INTS2Q9H0H0 1204 aaKnown RBP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 TLR6Q9Y2C9 796 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRKCH-219ENST00000555906 FAM208BQ5VWN6 2430 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 TMEM131Q92545 1883 aa20.5■□□□□ 0.87
PRKCH-219ENST00000555906 TYW5A2RUC4 315 aaKnown RBP20.49■□□□□ 0.87
PRKCH-219ENST00000555906 BCAT2O15382 392 aaPredicted RBP20.49■□□□□ 0.87
PRKCH-219ENST00000555906 HYAL3O43820 417 aaPredicted RBP20.49■□□□□ 0.87
PRKCH-219ENST00000555906 FYNP06241 537 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 CD70P32970 193 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 GPD2P43304 727 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 ACADSBP45954 432 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 ZNF423Q2M1K9 1284 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 NADSYN1Q6IA69 706 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 BEND5Q7L4P6 421 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 MFN1Q8IWA4 741 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 ZNF366Q8N895 744 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 MIS12Q9H081 205 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 MIR1-1HGQ9H1L0 117 aa20.49■□□□□ 0.87
PRKCH-219ENST00000555906 GOLGA6L7A0A1B0GV03 622 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 BIN1O00499 593 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 CER1O95813 267 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 POLR2EP19388 210 aaKnown RBP20.48■□□□□ 0.87
PRKCH-219ENST00000555906 RDXP35241 583 aaKnown RBP20.48■□□□□ 0.87
PRKCH-219ENST00000555906 FAM193AP78312 1265 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 TTC31Q49AM3 519 aaPredicted RBP20.48■□□□□ 0.87
PRKCH-219ENST00000555906 IL27RAQ6UWB1 636 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 FAM124AQ86V42 546 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 C1orf216Q8TAB5 229 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 STK32AQ8WU08 396 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 FAM149B1Q96BN6 582 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 SLC39A13Q96H72 371 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 LMLNQ96KR4 655 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 PRSS16Q9NQE7 514 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 EIF2B4Q9UI10 523 aaKnown RBP20.48■□□□□ 0.87
PRKCH-219ENST00000555906 ZMIZ1Q9ULJ6 1067 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 MSRB2Q9Y3D2 182 aa20.48■□□□□ 0.87
PRKCH-219ENST00000555906 SH3BP5O60239 455 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 ZNF883P0CG24 379 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 KRT5P13647 590 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 STX17P56962 302 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 RPS14P62263 151 aaKnown RBP20.47■□□□□ 0.87
PRKCH-219ENST00000555906 ZNF776Q68DI1 518 aaPredicted RBP20.47■□□□□ 0.87
PRKCH-219ENST00000555906 ENOSF1Q7L5Y1 443 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 TAC4Q86UU9 113 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 FIBINQ8TAL6 211 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 TTC17Q96AE7 1141 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 ST7Q9NRC1 585 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 KLK13Q9UKR3 277 aa20.47■□□□□ 0.87
PRKCH-219ENST00000555906 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.47■□□□□ 0.87
PRKCH-219ENST00000555906 PKD1L2Q7Z442 2459 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 PLXNA2O75051 1894 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 MED7O43513 233 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 FGFR1OPO95684 399 aaKnown RBP20.46■□□□□ 0.87
PRKCH-219ENST00000555906 DNTTP04053 509 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 ASLP04424 464 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 ACSL1P33121 698 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 MATKP42679 507 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 MS4A13Q5J8X5 152 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 RAB44Q7Z6P3 723 aaPredicted RBP20.46■□□□□ 0.87
PRKCH-219ENST00000555906 SCUBE3Q8IX30 993 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 SNX19Q92543 992 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 MYO19Q96H55 970 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 CAMK1GQ96NX5 476 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 SRRTQ9BXP5 876 aaKnown RBP20.46■□□□□ 0.87
PRKCH-219ENST00000555906 SLC4A5Q9BY07 1137 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 BTBD1Q9H0C5 482 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 NUCKS1Q9H1E3 243 aaKnown RBP20.46■□□□□ 0.87
PRKCH-219ENST00000555906 C6orf106Q9H6K1 298 aaPredicted RBP20.46■□□□□ 0.87
PRKCH-219ENST00000555906 OSGEPQ9NPF4 335 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 STIM2Q9P246 746 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 SUN2Q9UH99 717 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 NAALADL1Q9UQQ1 740 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 FREM2Q5SZK8 3169 aa20.46■□□□□ 0.87
PRKCH-219ENST00000555906 KNL1Q8NG31 2342 aa20.45■□□□□ 0.87
PRKCH-219ENST00000555906 SEMA4FO95754 770 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 APOEP02649 317 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 GNA15P30679 374 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 CSKP41240 450 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 AFF3P51826 1226 aaKnown RBP20.45■□□□□ 0.86
PRKCH-219ENST00000555906 RPS24P62847 133 aaKnown RBP20.45■□□□□ 0.86
PRKCH-219ENST00000555906 BNC1Q01954 994 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 CDH18Q13634 790 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 TRIP6Q15654 476 aaKnown RBP20.45■□□□□ 0.86
PRKCH-219ENST00000555906 DENND1BQ6P3S1 775 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 KDM1BQ8NB78 822 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms