RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ASB2Q96Q27 587 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 KXD1Q9BQD3 176 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 RPP25Q9BUL9 199 aaKnown RBP12.88□□□□□ -0.35
SHMT2-221ENST00000555773 TLR10Q9BXR5 811 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHMT2-221ENST00000555773 GPATCH2LQ9NWQ4 482 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
SHMT2-221ENST00000555773 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 TYW5A2RUC4 315 aaKnown RBP12.87□□□□□ -0.35
SHMT2-221ENST00000555773 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 E9PAM4 449 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 H3BRJ5 948 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 SRGAP2O75044 1071 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 LRIG2O94898 1065 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 NFATC1O95644 943 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 BMP1P13497 986 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 SLC6A4P31645 630 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 GJC1P36383 396 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 ZP2Q05996 745 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 EML3Q32P44 896 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-221ENST00000555773 MANEALQ5VSG8 457 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 RHBDF2Q6PJF5 856 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 ZNF683Q8IZ20 524 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 RAPGEF5Q92565 580 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 IRF7Q92985 503 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 TBC1D31Q96DN5 1066 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-221ENST00000555773 KCTD15Q96SI1 283 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-221ENST00000555773 ZNF670Q9BS34 389 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 PCDH18Q9HCL0 1135 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 TRPV5Q9NQA5 729 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 VANGL2Q9ULK5 521 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 EFR3BQ9Y2G0 817 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 WNT6Q9Y6F9 365 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
SHMT2-221ENST00000555773 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 C3orf70A6NLC5 250 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 EEF2KO00418 725 aaKnown RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FGF10O15520 208 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 DAPK3O43293 454 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CREB3O43889 395 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 ADH1CP00326 375 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 KRT1P04264 644 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 PRLRP16471 622 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 IL4RP24394 825 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 EPHB2P29323 1055 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 GDI1P31150 447 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 HOXC13P31276 330 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 TPI1P60174 286 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 GAD2Q05329 585 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 GRM2Q14416 872 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 DHCR24Q15392 516 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 TAZQ16635 292 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CPA6Q8N4T0 437 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 TSC1Q92574 1164 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 ALG3Q92685 438 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 PBKQ96KB5 322 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 WDR24Q96S15 920 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 MAK16Q9BXY0 300 aaKnown RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 ZYG11BQ9C0D3 744 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CARD9Q9H257 536 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 CWC15Q9P013 229 aaKnown RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 PACSIN2Q9UNF0 486 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-221ENST00000555773 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
SHMT2-221ENST00000555773 WASH4PA8MWX3 477 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 KCNK3O14649 394 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 ENC1O14682 589 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 TSPAN3O60637 253 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CLDN11O75508 207 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms