RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SCML2Q9UQR0 700 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 NYNRINQ9P2P1 1898 aaKnown RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 A8MXQ7 604 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 B8ZZF3 427 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 KIAA0391O15091 583 aaKnown RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 MDM4O15151 490 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 CYP26A1O43174 497 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 DFNA5O60443 496 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 GCNT3O95395 438 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 SEMA4FO95754 770 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 TNNC2P02585 160 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 CDK4P11802 303 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 JUPP14923 745 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 CDH8P55286 799 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 ALCAMQ13740 583 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 TEAD4Q15561 434 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 WDR72Q3MJ13 1102 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 SCD5Q86SK9 330 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 FAM124AQ86V42 546 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 ZNF276Q8N554 614 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 EPSTI1Q96J88 318 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 ELF4Q99607 663 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 CGRRF1Q99675 332 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 MYO9AB2RTY4 2548 aa9.55□□□□□ -0.88
PRKCH-218ENST00000555628 USP9YO00507 2555 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-218ENST00000555628 A0A1W2PR77 199 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 CDC14CA4D256 554 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 PRPF6O94906 941 aaKnown RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 C6P13671 934 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 CCDC130P13994 396 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 EPHA8P29322 1005 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 ATP5C1P36542 298 aaKnown RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 MYL6P60660 151 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 RPS14P62263 151 aaKnown RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 CXADRP78310 365 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 RHDQ02161 417 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 CCDC173Q0VFZ6 552 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 PSMD6Q15008 389 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 SURF1Q15526 300 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 DBN1Q16643 649 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 INAVAQ3KP66 663 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 RNFT1Q5M7Z0 435 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 ANKS1BQ7Z6G8 1248 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 KIAA0907Q7Z7F0 614 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 FAM181AQ8N9Y4 354 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 PLEKHO2Q8TD55 490 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 SNX19Q92543 992 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 SLC6A18Q96N87 628 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 LHX5Q9H2C1 402 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
PRKCH-218ENST00000555628 HSPBP1Q9NZL4 362 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
PRKCH-218ENST00000555628 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 A0A087X0B3 334 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 A0A1W2PQH9 124 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 WNT9AO14904 365 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 TGFB1I1O43294 461 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 SYNCRIPO60506 623 aaKnown RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 WISP1O95388 367 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 LDOC1O95751 146 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 EPHX1P07099 455 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 GDF10P55107 478 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 TNNC1P63316 161 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 ZBTB16Q05516 673 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 CYP24A1Q07973 514 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 ILKQ13418 452 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 NCOA4Q13772 614 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 SNRNP35Q16560 246 aaKnown RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 PRAMEF14Q5SWL7 426 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 CLEC20AQ6ZU45 233 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 EPM2AIP1Q7L775 607 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 CRYBG2Q8N1P7 616 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 CPXM2Q8N436 756 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 ENGASEQ8NFI3 743 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 NACA2Q9H009 215 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 CPNE5Q9HCH3 593 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 SERGEFQ9UGK8 458 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
PRKCH-218ENST00000555628 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 AK5Q9Y6K8 562 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 ATP8B3O60423 1300 aa9.53□□□□□ -0.88
PRKCH-218ENST00000555628 A0A1W2PPC4 97 aa9.52□□□□□ -0.89
PRKCH-218ENST00000555628 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
PRKCH-218ENST00000555628 ACADMP11310 421 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms