RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TBXAS1P24557 533 aaPredicted RBP11.29□□□□□ -0.6
TDP1-212ENST00000555565 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
TDP1-212ENST00000555565 MFAP3P55082 362 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
TDP1-212ENST00000555565 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
TDP1-212ENST00000555565 TMPRSS12Q86WS5 348 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 FAM217AQ8IXS0 508 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 KAT5Q92993 513 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 KIAA1257Q9ULG3 409 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 CLEC4EQ9ULY5 219 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 SNX11Q9Y5W9 270 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 STON1Q9Y6Q2 735 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 MUC22E2RYF6 1773 aaPredicted RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 J3QKU1 62 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 RNF225M0QZC1 329 aaPredicted RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 KCNK3O14649 394 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 GADD45BO75293 160 aaPredicted RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 SETSIPP0DME0 302 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 C7P10643 843 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 PPP1R2P41236 205 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 COPAP53621 1224 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 CLDN6P56747 220 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 MORC3Q14149 939 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 CCDC40Q4G0X9 1142 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 FOXR2Q6PJQ5 311 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 TMEM270Q6UE05 265 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 SCML4Q8N228 414 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 CPXM2Q8N436 756 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 KCTD13Q8WZ19 329 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 EDEM1Q92611 657 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 PLD4Q96BZ4 506 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
TDP1-212ENST00000555565 FCRL3Q96P31 734 aaPredicted RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 IPO9Q96P70 1041 aaKnown RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
TDP1-212ENST00000555565 NUMA1Q14980 2115 aa11.27□□□□□ -0.6
TDP1-212ENST00000555565 CKAP5Q14008 2032 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 BIN1O00499 593 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 PAPSS1O43252 624 aaPredicted RBP11.27□□□□□ -0.61
TDP1-212ENST00000555565 CALCAP01258 141 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 CYBBP04839 570 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 PAEPP09466 180 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 OXTRP30559 389 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 IL12RB1P42701 662 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 RGS7P49802 495 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 DAOAP59103 153 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 CFHR1Q03591 330 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 RTP5Q14D33 572 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
TDP1-212ENST00000555565 CNGA2Q16280 664 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 PMF1Q6P1K2 205 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.61
TDP1-212ENST00000555565 RNF139Q8WU17 664 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 SLC35F5Q8WV83 523 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 ORAI3Q9BRQ5 295 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 CNGB3Q9NQW8 809 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 ABCC13Q9NSE7 274 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.61
TDP1-212ENST00000555565 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 HBS1LQ9Y450 684 aaKnown RBP11.27□□□□□ -0.61
TDP1-212ENST00000555565 PCDHB4Q9Y5E5 795 aa11.27□□□□□ -0.61
TDP1-212ENST00000555565 TEX51A0A1B0GUA7 166 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 H0Y8X5 98 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 P4HA2O15460 535 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 MSI1O43347 362 aaKnown RBP11.26□□□□□ -0.61
TDP1-212ENST00000555565 TSPAN3O60637 253 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 LCP1P13796 627 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 BRD2P25440 801 aaKnown RBP11.26□□□□□ -0.61
TDP1-212ENST00000555565 HOXD9P28356 352 aaPredicted RBP11.26□□□□□ -0.61
TDP1-212ENST00000555565 GRK6P43250 576 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 HARS2P49590 506 aaKnown RBP11.26□□□□□ -0.61
TDP1-212ENST00000555565 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
TDP1-212ENST00000555565 ZNF132P52740 706 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 STX17P56962 302 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 CETN1Q12798 172 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 KCNH2Q12809 1159 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 TMEM215Q68D42 235 aa11.26□□□□□ -0.61
TDP1-212ENST00000555565 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms