RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C11orf70Q9BRQ4 267 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 TTYH3Q9C0H2 523 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX6-203ENST00000555416 THAP10Q9P2Z0 257 aaPredicted RBP14.17□□□□□ -0.14
SNX6-203ENST00000555416 INTS6Q9UL03 887 aaKnown RBP14.17□□□□□ -0.14
SNX6-203ENST00000555416 SNX10Q9Y5X0 201 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 STON1Q9Y6Q2 735 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 LRRC53A6NM62 1247 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 ADCY5O95622 1261 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 SERPINC1P01008 464 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 PABPC1P11940 636 aaKnown RBP14.16□□□□□ -0.14
SNX6-203ENST00000555416 PTMSP20962 102 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 PRKCHP24723 683 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 SCNN1AP37088 669 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 PBX1P40424 430 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 NUMBP49757 651 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 SULT1E1P49888 294 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 SNX16P57768 344 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 ZNF445P59923 1031 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 LMAN2Q12907 356 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 ENPP2Q13822 863 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CLEC16AQ2KHT3 1053 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 FUT11Q495W5 492 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 MPP7Q5T2T1 576 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 NUDT18Q6ZVK8 323 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 C14orf80Q86SX3 495 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 DNAAF5Q86Y56 855 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 KIAA2013Q8IYS2 634 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 ABCA7Q8IZY2 2146 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNX6-203ENST00000555416 HJURPQ8NCD3 748 aaPredicted RBP14.16□□□□□ -0.14
SNX6-203ENST00000555416 JOSD2Q8TAC2 188 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 RNF34Q969K3 372 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CFAP57Q96MR6 1250 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 AGPAT1Q99943 283 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 HINFPQ9BQA5 517 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 CD93Q9NPY3 652 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 METTL5Q9NRN9 209 aaKnown RBP14.16□□□□□ -0.14
SNX6-203ENST00000555416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.16□□□□□ -0.142e-7■■□□□ 12.7
SNX6-203ENST00000555416 TAS2R14Q9NYV8 317 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 GGA2Q9UJY4 613 aa14.16□□□□□ -0.14
SNX6-203ENST00000555416 MUC22E2RYF6 1773 aaPredicted RBP14.16□□□□□ -0.14
SNX6-203ENST00000555416 A0A1W2PQC6 194 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 PAGE1O75459 146 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 HLA-EP13747 358 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 NDUFV2P19404 249 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 CCR1P32246 355 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 CXCR3P49682 368 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 CENPCQ03188 943 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 CCDC6Q16204 474 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 PTPRNQ16849 979 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 SKOR2Q2VWA4 1001 aaPredicted RBP14.15□□□□□ -0.14
SNX6-203ENST00000555416 PLK5Q496M5 336 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 FILIP1LQ4L180 1135 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 SH3PXD2AQ5TCZ1 1133 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 LAIR1Q6GTX8 287 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 FBXL22Q6P050 247 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 TRIM72Q6ZMU5 477 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 MON1BQ7L1V2 547 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 BNIPLQ7Z465 357 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 MFN1Q8IWA4 741 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 ATP6V0D2Q8N8Y2 350 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 FIBINQ8TAL6 211 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 IGSF8Q969P0 613 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 DUSP15Q9H1R2 295 aaPredicted RBP14.15□□□□□ -0.14
SNX6-203ENST00000555416 POLMQ9NP87 494 aaPredicted RBP14.15□□□□□ -0.14
SNX6-203ENST00000555416 MBD1Q9UIS9 605 aaPredicted RBP14.15□□□□□ -0.14
SNX6-203ENST00000555416 HS3ST4Q9Y661 456 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 SPAG17Q6Q759 2223 aa14.15□□□□□ -0.14
SNX6-203ENST00000555416 TCRBV5S1A1TA0A578 114 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 FERP16591 822 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 ABCB4P21439 1286 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 GBP1P32455 592 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 P2RY2P41231 377 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 SPEM2Q0P670 501 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 AUHQ13825 339 aaKnown RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 MAP7D1Q3KQU3 841 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 SLC25A52Q3SY17 297 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 MBLAC2Q68D91 279 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 TRMT11Q7Z4G4 463 aaKnown RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 PHF13Q86YI8 300 aaPredicted RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 APCDD1Q8J025 514 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 OR52K2Q8NGK3 314 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 PGAP3Q96FM1 320 aaPredicted RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 DDX50Q9BQ39 737 aaKnown RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 MTG2Q9H4K7 406 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 SEPT11Q9NVA2 429 aaKnown RBP14.14□□□□□ -0.15
SNX6-203ENST00000555416 ARHGEF38Q9NXL2 777 aa14.14□□□□□ -0.15
SNX6-203ENST00000555416 BCCIPQ9P287 314 aaKnown RBP eCLIP14.14□□□□□ -0.15
SNX6-203ENST00000555416 RAB23Q9ULC3 237 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms