RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CHADO15335 359 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CEP104O60308 925 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 RTN2O75298 545 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DAB1O75553 588 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TRUB2O95900 331 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 GLI1P08151 1106 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TFE3P19532 575 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ACTN2P35609 894 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 FLT3P36888 993 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 LMAN1P49257 510 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ATP11AP98196 1134 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 FCHO2Q0JRZ9 810 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ANO4Q32M45 955 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ZC3H12AQ5D1E8 599 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 C11orf63Q6NUN7 778 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DCUN1D2Q6PH85 259 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 KLHDC10Q6PID8 442 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TPGS1Q6ZTW0 290 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SLC26A9Q7LBE3 791 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 GSPT2Q8IYD1 628 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 UBALD2Q8IYN6 164 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 JOSD2Q8TAC2 188 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SLC35G2Q8TBE7 412 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 OSCP1Q8WVF1 389 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 EDAQ92838 391 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CFAP57Q96MR6 1250 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MCEEQ96PE7 176 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 KRT12Q99456 494 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TRIM62Q9BVG3 475 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CARD9Q9H257 536 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MFSD1Q9H3U5 465 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 EPB41L5Q9HCM4 733 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 OBP2AQ9NY56 170 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 E2F8A0AVK6 867 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 OTOL1A6NHN0 477 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 TSPAN3O60637 253 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 MTA2O94776 668 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 PDGFBP01127 241 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 KLKB1P03952 638 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 IVLP07476 585 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 KRT3P12035 628 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 ALADP13716 330 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 PDGFRAP16234 1089 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 RFC1P35251 1148 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 MATKP42679 507 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 HARS2P49590 506 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 PFKPQ01813 784 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 GUCY2DQ02846 1103 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 RUNX3Q13761 415 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 TRIP4Q15650 581 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 EML3Q32P44 896 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 ITPRIPL2Q3MIP1 535 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 SLC44A4Q53GD3 710 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 TRNP1Q6NT89 227 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 MSANTD2Q6P1R3 559 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 LEKR1Q6ZMV7 388 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 MAATS1Q7Z4T9 603 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 NAT16Q8N8M0 369 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 CCDC26Q8TAB7 109 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 RXFP2Q8WXD0 754 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 ATP2A3Q93084 1043 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 SERPINB11Q96P15 392 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 RUFY1Q96T51 708 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 TBCBQ99426 244 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 HPS4Q9NQG7 708 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 PLK2Q9NYY3 685 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 CWC15Q9P013 229 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 CNOT8Q9UFF9 292 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 NDRG2Q9UN36 371 aaKnown RBP10.22□□□□□ -0.77
PSEN1-213ENST00000555386 PIAS3Q9Y6X2 628 aa10.22□□□□□ -0.77
PSEN1-213ENST00000555386 GOLGA6L7A0A1B0GV03 622 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 KRBA1A5PL33 1030 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 KRIT1O00522 736 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 SLC9A3R1O14745 358 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 RAD51CO43502 376 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 BUB1BO60566 1050 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 GBP1P32455 592 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 NOS2P35228 1153 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 TIE1P35590 1138 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 DNA2P51530 1060 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 RPL7AP62424 266 aaKnown RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 DEUP1Q05D60 604 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 PDGFRLQ15198 375 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 RAB6CQ53S08 254 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 LY6G5CQ5SRR4 150 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 SH3PXD2AQ5TCZ1 1133 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 RFWD3Q6PCD5 774 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 TMEM25Q86YD3 366 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 CPA6Q8N4T0 437 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF276Q8N554 614 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms