RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 P2RY11Q96G91 374 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 KCNK4Q9NYG8 393 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 DTLQ9NZJ0 730 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 BFARQ9NZS9 450 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 SOX13Q9UN79 622 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 LY75O60449 1722 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 JCHAINP01591 159 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 ITGA2BP08514 1039 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 RAG1P15918 1043 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 TSPAN8P19075 237 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 MX2P20592 715 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CTC1Q2NKJ3 1217 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 IYDQ6PHW0 289 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PHTF2Q8N3S3 785 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PTCD3Q96EY7 689 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 THAP1Q9NVV9 213 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PEX1O43933 1283 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 IREB2P48200 963 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 TPI1P60174 286 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 MRPS22P82650 360 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 USP10Q14694 798 aaKnown RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CYTH1Q15438 398 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 STILQ15468 1287 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 FZD8Q9H461 694 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 PMPCBO75439 489 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 POLBP06746 335 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ETV4P43268 484 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 SLC12A2P55011 1212 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ART3Q13508 389 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 RIOX2Q8IUF8 465 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 APPL2Q8NEU8 664 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 PPWD1Q96BP3 646 aaKnown RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 CNBD2Q96M20 576 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 APBA2Q99767 749 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 A0A096LPK6 155 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 PEX2P28328 305 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 SNX16P57768 344 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 TMEM198Q66K66 360 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 FNIP1Q8TF40 1166 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 EBF3Q9H4W6 596 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 MYOCOSA0A1B0GUC4 107 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 FAM189A1O60320 539 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 HNRNPCL1O60812 293 aaKnown RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 WFS1O76024 890 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ATG7O95352 703 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 TGFB3P10600 412 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 VAV1P15498 845 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 FGFR3P22607 806 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
XRCC3-208ENST00000554811 MED21Q13503 144 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 LCLAT1Q6UWP7 414 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF781Q8N8C0 355 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 GDPD5Q8WTR4 605 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 ZFP42Q96MM3 310 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 CDHR5Q9HBB8 845 aa12.17□□□□□ -0.46
XRCC3-208ENST00000554811 SIN3BO75182 1162 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 CHRNGP07510 517 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 IL4RP24394 825 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 NAGLUP54802 743 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 RBBP5Q15291 538 aaKnown RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 PPM1LQ5SGD2 360 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 MZB1Q8WU39 189 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 E7ESA3 106 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 TK2O00142 265 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 GLRA3O75311 464 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 MCF2P10911 925 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 MPSTP25325 297 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 ICAM3P32942 547 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 GRIK4Q16099 956 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 OLFML1Q6UWY5 402 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 PLD6Q8N2A8 252 aaKnown RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 RAB3IL1Q8TBN0 382 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 ANLNQ9NQW6 1124 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms