RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SLC9A4Q6AI14 798 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 RWDD4Q6NW29 188 aaKnown RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 HTR3DQ70Z44 454 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 DENND1CQ8IV53 801 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 SPATA4Q8NEY3 305 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 PCDH19Q8TAB3 1148 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 ITFG1Q8TB96 612 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 SH3RF2Q8TEC5 729 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 FAM161BQ96MY7 647 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 APOL5Q9BWW9 433 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 ARHGEF4Q9NR80 690 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 CFAP97Q9P2B7 532 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 XPO7Q9UIA9 1087 aaKnown RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 STOML2Q9UJZ1 356 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 AGO1Q9UL18 857 aaKnown RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 RAD54BQ9Y620 910 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 ZFP37Q9Y6Q3 630 aaPredicted RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 MYO7AQ13402 2215 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 OBSL1O75147 1896 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 FAM72CH0Y354 149 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 PHF2O75151 1096 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 CHKAP35790 457 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 NR2C2P49116 596 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 DYNLT1P63172 113 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 USP4Q13107 963 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 CCNG2Q16589 344 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 FAM72AQ5TYM5 149 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 FAM72DQ6L9T8 149 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 CCDC70Q6NSX1 233 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 Q6ZNB5 142 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 GET4Q7L5D6 327 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 ADAT2Q7Z6V5 191 aaKnown RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 FAM72BQ86X60 149 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 NPAS3Q8IXF0 933 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 C12orf50Q8NA57 414 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 ING5Q8WYH8 240 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 P3H4Q92791 437 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 E2F7Q96AV8 911 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 RPRD1AQ96P16 312 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 PRMT1Q99873 361 aaKnown RBP14.82□□□□□ -0.04
SHOX2-206ENST00000554685 ZYG11BQ9C0D3 744 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 S1PR5Q9H228 398 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 SMARCAL1Q9NZC9 954 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 TBC1D14Q9P2M4 693 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 VANGL2Q9ULK5 521 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 ANAPC1Q9H1A4 1944 aa14.82□□□□□ -0.04
SHOX2-206ENST00000554685 IGLV3-10A0A075B6K4 115 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 WASH4PA8MWX3 477 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 NRG2O14511 850 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 RIOK3O14730 519 aaKnown RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 SLC9A3R1O14745 358 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 DCLK1O15075 740 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 KLKB1P03952 638 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 RHOQP17081 205 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 ERCC2P18074 760 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 AMPD1P23109 780 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 CHRNA3P32297 505 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 FNTAP49354 379 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 LMNB2Q03252 620 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 PAFAH1B3Q15102 231 aaKnown RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 LLGL1Q15334 1064 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 CYP1B1Q16678 543 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 C5orf22Q49AR2 442 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 NADSYN1Q6IA69 706 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 FBXL22Q6P050 247 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 DRICH1Q6PGQ1 229 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 ANKS1BQ7Z6G8 1248 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 ARID3BQ8IVW6 561 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 FAM217AQ8IXS0 508 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 LGI2Q8N0V4 545 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 CPXM2Q8N436 756 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 PQLC3Q8N755 202 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 PLD5Q8N7P1 536 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 ZSCAN18Q8TBC5 510 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 FGF13Q92913 245 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 MAGOHBQ96A72 148 aaKnown RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 OTUB2Q96DC9 234 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 AP1M1Q9BXS5 423 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 OBP2AQ9NY56 170 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 FEZ2Q9UHY8 353 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-206ENST00000554685 CD207Q9UJ71 328 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 CDH7Q9ULB5 785 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 SNX10Q9Y5X0 201 aa14.81□□□□□ -0.04
SHOX2-206ENST00000554685 TCRBV7S2A1N4TA0A589 114 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 DRGXA6NNA5 263 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 EFCAB8A8MWE9 144 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 MCF2LO15068 1137 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 NCAM2O15394 837 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 GGCXP38435 758 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 MAPKAPK2P49137 400 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 C2orf54Q08AI8 447 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 NOMO1Q15155 1222 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 SIX1Q15475 284 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-206ENST00000554685 ZNF77Q15935 545 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms