RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 KIAA0895LQ68EN5 471 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 FOXR2Q6PJQ5 311 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 LRRC52Q8N7C0 313 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 PCED1BQ96HM7 432 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 DHTKD1Q96HY7 919 aaPredicted RBP17.69■□□□□ 0.42
NEK9-204ENST00000554258 FUCA2Q9BTY2 467 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 IKZF4Q9H2S9 585 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 SGK2Q9HBY8 427 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.69■□□□□ 0.42
NEK9-204ENST00000554258 CGNQ9P2M7 1197 aaKnown RBP17.69■□□□□ 0.42
NEK9-204ENST00000554258 LSM7Q9UK45 103 aaKnown RBP17.69■□□□□ 0.42
NEK9-204ENST00000554258 TRAF3IP3Q9Y228 551 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 CRYBG3Q68DQ2 2970 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 PDXKO00764 312 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 OPA1O60313 960 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 CD38P28907 300 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 TUBP50607 506 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 MFAP3P55082 362 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 CLN3Q13286 438 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 NFIL3Q16649 462 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 SLFN12LQ6IEE8 588 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 IGF2-ASQ6U949 168 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 NELFCDQ8IXH7 590 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 FBXO10Q9UK96 956 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 AGO2Q9UKV8 859 aaKnown RBP17.68■□□□□ 0.42
NEK9-204ENST00000554258 SATB2Q9UPW6 733 aa17.68■□□□□ 0.42
NEK9-204ENST00000554258 SETD2Q9BYW2 2564 aaPredicted RBP17.68■□□□□ 0.42
NEK9-204ENST00000554258 RTN3O95197 1032 aaPredicted RBP17.67■□□□□ 0.42
NEK9-204ENST00000554258 IL18RAPO95256 599 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 PDGFRBP09619 1106 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 GARTP22102 1010 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 RXRGP48443 463 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 CACNA2D1P54289 1103 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 FOXK1P85037 733 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 IGFBP7Q16270 282 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 MDH1BQ5I0G3 518 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 KANSL1Q7Z3B3 1105 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 SYCP3Q8IZU3 236 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 NUP93Q8N1F7 819 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 OXR1Q8N573 874 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 C1orf127Q8N9H9 656 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 GOLGA5Q8TBA6 731 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 MYCBPAPQ8TBZ2 947 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 SLC46A1Q96NT5 459 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 CIPCQ9C0C6 399 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 GZF1Q9H116 711 aaPredicted RBP17.67■□□□□ 0.42
NEK9-204ENST00000554258 DMAC2Q9NW81 257 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 ELOVL2Q9NXB9 296 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 MAPK8IP1Q9UQF2 711 aa17.67■□□□□ 0.42
NEK9-204ENST00000554258 RP1L1Q8IWN7 2480 aaPredicted RBP17.66■□□□□ 0.42
NEK9-204ENST00000554258 CELSR2Q9HCU4 2923 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 TISP43B9A030 160 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 SIGLEC6O43699 453 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 GREM1O60565 184 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 DNTTP04053 509 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 KRT19P08727 400 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 ARID5AQ03989 594 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 CAMK2GQ13555 558 aaPredicted RBP17.66■□□□□ 0.42
NEK9-204ENST00000554258 STIM1Q13586 685 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 DPCR1Q3MIW9 517 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 TTC31Q49AM3 519 aaPredicted RBP17.66■□□□□ 0.42
NEK9-204ENST00000554258 SLC9A9Q8IVB4 645 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 SORCS1Q8WY21 1168 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 SGF29Q96ES7 293 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 MED15Q96RN5 788 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 EPN3Q9H201 632 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 AGPAT3Q9NRZ7 376 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 TMEM30AQ9NV96 361 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 ANO10Q9NW15 660 aa17.66■□□□□ 0.42
NEK9-204ENST00000554258 PLEKHB1Q9UF11 243 aaPredicted RBP17.66■□□□□ 0.42
NEK9-204ENST00000554258 TDRD6O60522 2096 aaKnown RBP17.66■□□□□ 0.42
NEK9-204ENST00000554258 KIAA0391O15091 583 aaKnown RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 EFSO43281 561 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 GJB6O95452 261 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 ERCC5P28715 1186 aaPredicted RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 POU5F1Q01860 360 aaKnown RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 ZBTB16Q05516 673 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 TYRO3Q06418 890 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 EIF4HQ15056 248 aaKnown RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 EDRF1Q3B7T1 1238 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 ANKS1BQ7Z6G8 1248 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 ZC3H3Q8IXZ2 948 aaKnown RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 ERVMER34-1Q9H9K5 563 aa17.65■□□□□ 0.42
NEK9-204ENST00000554258 ATXN7L1Q9ULK2 861 aaPredicted RBP17.65■□□□□ 0.42
NEK9-204ENST00000554258 A0A1W2PR77 199 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 SYCE3A1L190 88 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 TLR4O00206 839 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 TRIM38O00635 465 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 PSMA7O14818 248 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms