RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 NDUFAF5Q5TEU4 345 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 MAVSQ7Z434 540 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 CCDC60Q8IWA6 550 aaPredicted RBP9.79□□□□□ -0.84
SIX4-202ENST00000554079 ZNF786Q8N393 782 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 PARP8Q8N3A8 854 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 MFSD4AQ8N468 514 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 GALNT6Q8NCL4 622 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
SIX4-202ENST00000554079 IL12RB2Q99665 862 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 TUBA1CQ9BQE3 449 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 RIOK1Q9BRS2 568 aaKnown RBP9.79□□□□□ -0.84
SIX4-202ENST00000554079 INTS2Q9H0H0 1204 aaKnown RBP9.79□□□□□ -0.84
SIX4-202ENST00000554079 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 STMN3Q9NZ72 180 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 UBA2Q9UBT2 640 aaPredicted RBP9.79□□□□□ -0.84
SIX4-202ENST00000554079 SHOC2Q9UQ13 582 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
SIX4-202ENST00000554079 RWDD3Q9Y3V2 267 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 TCAF1Q9Y4C2 921 aa9.79□□□□□ -0.84
SIX4-202ENST00000554079 IQANK1A0A1B0GTG1 560 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 FOXN3O00409 490 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 BCAS2O75934 225 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 SEC24DO94855 1032 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 KCNH1O95259 989 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 ZBTB7AO95365 584 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 NR3C1P04150 777 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 ITIH1P19827 911 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 GARTP22102 1010 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 RFC1P35251 1148 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 NUDT1P36639 197 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CLCNKBP51801 687 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 MAPK10P53779 464 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 DSTNP60981 165 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 CLCQ05315 142 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 TNK2Q07912 1038 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 FCHO2Q0JRZ9 810 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SELPLGQ14242 412 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 COL19A1Q14993 1142 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CHRNA2Q15822 529 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CALCRLQ16602 461 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SNAP47Q5SQN1 464 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 KRT79Q5XKE5 535 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PDPK2PQ6A1A2 396 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 NXNQ6DKJ4 435 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 HEATR3Q7Z4Q2 680 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 GALNT7Q86SF2 657 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SLC22A16Q86VW1 577 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 ARMC8Q8IUR7 673 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PHTF2Q8N3S3 785 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SIMC1Q8NDZ2 872 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 FIG4Q92562 907 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 TFAP2CQ92754 450 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SNX18Q96RF0 628 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CSF3RQ99062 836 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SERPINI1Q99574 410 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CPNE5Q9HCH3 593 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 ATP13A2Q9NQ11 1180 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 APEX2Q9UBZ4 518 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 IPO11Q9UI26 975 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 PLLPQ9Y342 182 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 UGT2A1Q9Y4X1 527 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 LINC00854A0A1B0GVQ3 168 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 A8MX80 341 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PDXKO00764 312 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SLC37A4O43826 429 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CALUO43852 315 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 ALDH1A2O94788 518 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 ARHGEF15O94989 841 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 RALAP11233 206 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 MYL4P12829 197 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PRKACAP17612 351 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SERPINB1P30740 379 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 FMO5P49326 533 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PRKAA2P54646 552 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 RAD23AP54725 363 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 MLLT6P55198 1093 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 VPS72Q15906 364 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CARTPTQ16568 116 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 KNOP1Q1ED39 458 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 HYIQ5T013 277 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 IQSEC1Q6DN90 963 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 TTC33Q6PID6 262 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 NSMFQ6X4W1 530 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 UNC5AQ6ZN44 842 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 KCTD8Q6ZWB6 473 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 UBR7Q8N806 425 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 DTX3Q8N9I9 347 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 CMASQ8NFW8 434 aaPredicted RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 PDCD6IPQ8WUM4 868 aaKnown RBP9.78□□□□□ -0.84
SIX4-202ENST00000554079 UQCC2Q9BRT2 126 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 APOL6Q9BWW8 343 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 RAD21L1Q9H4I0 556 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 SP140LQ9H930 580 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms