RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 TMCO4Q5TGY1 634 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 HTR3DQ70Z44 454 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 DDX42Q86XP3 938 aaKnown RBP eCLIP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 RFX6Q8HWS3 928 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 ELMOD1Q8N336 334 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 RTL3Q8N8U3 475 aaKnown RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 CASKIN2Q8WXE0 1202 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 LRRC45Q96CN5 670 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 SNF8Q96H20 258 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 ZFRQ96KR1 1074 aaKnown RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 ZNF512Q96ME7 567 aaPredicted RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 PPP1R2P1Q96PQ5 205 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 FERMT1Q9BQL6 677 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 NUP205Q92621 2012 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 FAM170AA1A519 330 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FAM72CH0Y354 149 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 GRM6O15303 877 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 EIF3HO15372 352 aaKnown RBP eCLIP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 COCHO43405 550 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 OPHN1O60890 802 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CLASP2O75122 1294 aaKnown RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PPFIA2O75334 1257 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 LRG1P02750 347 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 C8AP07357 584 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CA3P07451 260 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CCNCP24863 283 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 HSPA9P38646 679 aaKnown RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CARSP49589 748 aaKnown RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 RABGGTBP53611 331 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 MYO7AQ13402 2215 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 GPM6BQ13491 265 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FAM72AQ5TYM5 149 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PIK3R6Q5UE93 754 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 SDHAF4Q5VUM1 108 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FAM72DQ6L9T8 149 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 HIBCHQ6NVY1 386 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 TMCO3Q6UWJ1 677 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ZDHHC24Q6UX98 284 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 Q6ZNB5 142 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 GAREM2Q75VX8 874 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CHST9Q7L1S5 443 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FAM72BQ86X60 149 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 CPXM2Q8N436 756 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FUT8Q9BYC5 575 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ADAM7Q9H2U9 754 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ENTPD7Q9NQZ7 604 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 DZANK1Q9NVP4 752 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FAM53CQ9NYF3 392 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 PAK5Q9P286 719 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 MSRAQ9UJ68 235 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 TRHDEQ9UKU6 1024 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 ZNF148Q9UQR1 794 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 HS3ST4Q9Y661 456 aa11.22□□□□□ -0.61
PABPN1-203ENST00000553960 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
PABPN1-203ENST00000553960 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 ATG2AQ2TAZ0 1938 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 CHD7Q9P2D1 2997 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 ERI2A8K979 691 aaKnown RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 HIDE1A8MVS5 230 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 E7ESA3 106 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 E9PAM4 449 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 DNALI1O14645 258 aaPredicted RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 ACSL4O60488 711 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 XYLBO75191 536 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 SOAT2O75908 522 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 STC2O76061 302 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 KRT14P02533 472 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 MYBL2P10244 700 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 TSHRP16473 764 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 PTPN2P17706 415 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 AMPD1P23109 780 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 EPHB2P29323 1055 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 GJC1P36383 396 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 RPL21P46778 160 aaKnown RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 KCNJ1P48048 391 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 SLC11A2P49281 568 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 HARS2P49590 506 aaKnown RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 SLC7A5Q01650 507 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 CALCOCO2Q13137 446 aa11.21□□□□□ -0.61
PABPN1-203ENST00000553960 AUHQ13825 339 aaKnown RBP11.21□□□□□ -0.61
PABPN1-203ENST00000553960 COL19A1Q14993 1142 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms