RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 POT1Q9NUX5 634 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 TMEM184CQ9NVA4 438 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 TMEM45AQ9NWC5 275 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 B3GNT3Q9Y2A9 372 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.76□□□□□ -1.81
VRK1-202ENST00000553683 TTBK1Q5TCY1 1321 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 A0A087WV62 115 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 TRBV5-3A0A0A0MS03 114 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 KIR2DS5A0A0G2JLQ3 304 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A10PA6NDY2 464 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 MBD3L5A6NJ08 208 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 KIR2DS3K7RE56 304 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 CNTN5O94779 1100 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 LCKP06239 509 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 ITGA2BP08514 1039 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 TBXAS1P24557 533 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 IL6STP40189 918 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 ALDH7A1P49419 539 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 CCT4P50991 539 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 FOXL2P58012 376 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 ICA1Q05084 483 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 FOXO1Q12778 655 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 MTX1Q13505 466 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 DLGAP5Q15398 846 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 ZACNQ401N2 412 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 ZNF569Q5MCW4 686 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 ATPAF1Q5TC12 328 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 LIPMQ5VYY2 423 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 XRRA1Q6P2D8 792 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 PIM3Q86V86 326 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 RHPN2Q8IUC4 686 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 MMP21Q8N119 569 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 C9orf106Q8NAJ2 232 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 IPO4Q8TEX9 1081 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 C18orf8Q96DM3 657 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 SLC39A13Q96H72 371 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 REXO5Q96IC2 774 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 HTATIP2Q9BUP3 242 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 KATNAL1Q9BW62 490 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 MOV10Q9HCE1 1003 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 HEY2Q9UBP5 337 aa3.75□□□□□ -1.81
VRK1-202ENST00000553683 HERC5Q9UII4 1024 aaKnown RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 MAGED2Q9UNF1 606 aaPredicted RBP3.75□□□□□ -1.81
VRK1-202ENST00000553683 ADAM10O14672 748 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 RPP40O75818 363 aaKnown RBP3.74□□□□□ -1.81
VRK1-202ENST00000553683 ST6GAL1P15907 406 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 SERPINF1P36955 418 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 SLC37A1P57057 533 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 RPL15P61313 204 aaKnown RBP3.74□□□□□ -1.81
VRK1-202ENST00000553683 BRD3Q15059 726 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 SYCP2LQ5T4T6 812 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 AWAT2Q6E213 333 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 NFRKBQ6P4R8 1299 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 DHRS13Q6UX07 377 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 ZNF793Q6ZN11 406 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 NOL8Q76FK4 1167 aaKnown RBP3.74□□□□□ -1.81
VRK1-202ENST00000553683 EXD3Q8N9H8 876 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 GPR78Q96P69 363 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 WDR83Q9BRX9 315 aaKnown RBP3.74□□□□□ -1.81
VRK1-202ENST00000553683 PIMREGQ9BSJ6 248 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 TASP1Q9H6P5 420 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 EPS8L2Q9H6S3 715 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 TXNRD2Q9NNW7 524 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 LIN7CQ9NUP9 197 aaKnown RBP3.74□□□□□ -1.81
VRK1-202ENST00000553683 TMLHEQ9NVH6 421 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 CNTN6Q9UQ52 1028 aa3.74□□□□□ -1.81
VRK1-202ENST00000553683 LMTK3Q96Q04 1460 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A18PA6NE21 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A16PA6NEW6 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A9PA6NNJ1 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A5PA8MXJ8 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 ZNF814B7Z6K7 855 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 PROB1E7EW31 1015 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 DNPH1O43598 174 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 ASNA1O43681 348 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 WNT1P04628 370 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A15PP0C7V4 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 FAM90A14PP0C7W9 464 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 SERPINB3P29508 390 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 GRK5P34947 590 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 MCM2P49736 904 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 POLGP54098 1239 aaPredicted RBP3.73□□□□□ -1.81
VRK1-202ENST00000553683 FOXG1P55316 489 aaPredicted RBP3.73□□□□□ -1.81
VRK1-202ENST00000553683 TAS2R50P59544 299 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 PUM3Q15397 648 aaKnown RBP3.73□□□□□ -1.81
VRK1-202ENST00000553683 PFKFB4Q16877 469 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 LEXMQ3ZCV2 418 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 MIDNQ504T8 468 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 TANGO2Q6ICL3 276 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 LRIG3Q6UXM1 1119 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 RAB11FIP2Q7L804 512 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 GLCCI1Q86VQ1 547 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 MYLK4Q86YV6 388 aaPredicted RBP3.73□□□□□ -1.81
VRK1-202ENST00000553683 ADGRF3Q8IZF5 1079 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 ZNF366Q8N895 744 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 ARL14EPQ8N8R7 260 aaPredicted RBP3.73□□□□□ -1.81
VRK1-202ENST00000553683 NRACQ8N912 160 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 ATP2A3Q93084 1043 aa3.73□□□□□ -1.81
VRK1-202ENST00000553683 RTKNQ9BST9 563 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms