RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
SRP54-203ENST00000553544 GBP4Q96PP9 640 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 MED15Q96RN5 788 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 DCLK3Q9C098 648 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 C6orf106Q9H6K1 298 aaPredicted RBP12.34□□□□□ -0.43
SRP54-203ENST00000553544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRP54-203ENST00000553544 NUDT5Q9UKK9 219 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 A0A1W2PQH9 124 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 PLK4O00444 970 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CAPN9O14815 690 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 MDM4O15151 490 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 STC2O76061 302 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 GNA14O95837 355 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 KLKB1P03952 638 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 RALAP11233 206 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 ITPKBP27987 946 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 ACSL1P33121 698 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 HNF1BP35680 557 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 GRIA4P48058 902 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CCT8P50990 548 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 YWHAEP62258 255 aaKnown RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 KCNH2Q12809 1159 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 LRMPQ12912 555 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CAMK4Q16566 473 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 FYB2Q5VWT5 728 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 ANKS1BQ7Z6G8 1248 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 PIGZQ86VD9 579 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 OR2T3Q8NH03 318 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 NXPE2Q96DL1 559 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CDK5RAP1Q96SZ6 601 aaKnown RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 SLC2A11Q9BYW1 496 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 PRORYQ9H606 182 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 TM9SF3Q9HD45 589 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 FTSJ1Q9UET6 329 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.33□□□□□ -0.44
SRP54-203ENST00000553544 PCDHGA1Q9Y5H4 931 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 AK5Q9Y6K8 562 aa12.33□□□□□ -0.44
SRP54-203ENST00000553544 H0Y8X5 98 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 TSPAN3O60637 253 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 C1SP09871 688 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 VDRP11473 427 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 PRKCHP24723 683 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 CD27P26842 260 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 SEMG2Q02383 582 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
SRP54-203ENST00000553544 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 SORCS1Q8WY21 1168 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 BIRC7Q96CA5 298 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 BTBD1Q9H0C5 482 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 LHX5Q9H2C1 402 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 KIAA1257Q9ULG3 409 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
SRP54-203ENST00000553544 SHROOM3Q8TF72 1996 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 CFAP46Q8IYW2 2715 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 CAPN8A6NHC0 703 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 RNF225M0QZC1 329 aaPredicted RBP12.31□□□□□ -0.44
SRP54-203ENST00000553544 TULP2O00295 520 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 O00370 1275 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 XPO1O14980 1071 aaKnown RBP12.31□□□□□ -0.44
SRP54-203ENST00000553544 PAPSS1O43252 624 aaPredicted RBP12.31□□□□□ -0.44
SRP54-203ENST00000553544 C1QL1O75973 258 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 FSBPO95073 299 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 SEMA4FO95754 770 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
SRP54-203ENST00000553544 PAEPP09466 180 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 CTSKP43235 329 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 BCAT1P54687 386 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 C21orf59P57076 290 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 GCNT1Q02742 428 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 PDE4CQ08493 712 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 CETN1Q12798 172 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 CAMK2GQ13555 558 aaPredicted RBP12.31□□□□□ -0.44
SRP54-203ENST00000553544 GOLGA7BQ2TAP0 167 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 SGO2Q562F6 1265 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 TMEM270Q6UE05 265 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 BAP1Q92560 729 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 KAT5Q92993 513 aa12.31□□□□□ -0.44
SRP54-203ENST00000553544 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms