RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 PCDHA7Q9UN72 937 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 TRAF3IP3Q9Y228 551 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 AK5Q9Y6K8 562 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 FAM47DPA6NHR8 397 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 RRP8O43159 456 aaKnown RBP17.6■□□□□ 0.41
CACNB3-222ENST00000552465 CALUO43852 315 aaPredicted RBP17.6■□□□□ 0.41
CACNB3-222ENST00000552465 LATS1O95835 1130 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 ITGAVP06756 1048 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 SLFN14P0C7P3 912 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 POLR2EP19388 210 aaKnown RBP17.6■□□□□ 0.41
CACNB3-222ENST00000552465 CD70P32970 193 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 SGSHP51688 502 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 RAD23BP54727 409 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 SLC8A3P57103 927 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 RTP5Q14D33 572 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
CACNB3-222ENST00000552465 TTC39CQ8N584 583 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 NRSN2Q9GZP1 204 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 FBXL12Q9NXK8 326 aa17.6■□□□□ 0.41
CACNB3-222ENST00000552465 TMEM131Q92545 1883 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 TULP2O00295 520 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 ABCB4P21439 1286 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 ACADVLP49748 655 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 ENPEPQ07075 957 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 BSPRYQ5W0U4 402 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 FBXL19Q6PCT2 694 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 NCEH1Q6PIU2 408 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 EID2Q8N6I1 236 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 WFDC5Q8TCV5 224 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 RNF139Q8WU17 664 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 TSC1Q92574 1164 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 EDEM1Q92611 657 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 FAXDC2Q96IV6 333 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 NEUROG2Q9H2A3 272 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 TMEM8AQ9HCN3 771 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 CISHQ9NSE2 258 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 SERGEFQ9UGK8 458 aa17.59■□□□□ 0.41
CACNB3-222ENST00000552465 YKT6O15498 198 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.4
CACNB3-222ENST00000552465 KRT13P13646 458 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 CD38P28907 300 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 ME1P48163 572 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 SFSWAPQ12872 951 aaKnown RBP17.58■□□□□ 0.4
CACNB3-222ENST00000552465 NFIL3Q16649 462 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 MPP7Q5T2T1 576 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 HES3Q5TGS1 186 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 SNIP1Q8TAD8 396 aaKnown RBP17.58■□□□□ 0.4
CACNB3-222ENST00000552465 SEMA4DQ92854 862 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 TTC17Q96AE7 1141 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 MYO19Q96H55 970 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 LMLNQ96KR4 655 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.4
CACNB3-222ENST00000552465 LRRC4Q9HBW1 653 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 AASDHPPTQ9NRN7 309 aa17.58■□□□□ 0.4
CACNB3-222ENST00000552465 MUC22E2RYF6 1773 aaPredicted RBP17.58■□□□□ 0.4
CACNB3-222ENST00000552465 COL5A1P20908 1838 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 A0A1W2PR77 199 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 LRRC72A6NJI9 287 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 YJEFN3A6XGL0 299 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 C10orf142B7Z368 130 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 E7ENQ6 273 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 WNT9AO14904 365 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 XPO1O14980 1071 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 MSI1O43347 362 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 TBL1XO60907 577 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 RNASEH1O60930 286 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 SIN3BO75182 1162 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 PLA2G2AP14555 144 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 NR2F2P24468 414 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 KCNJ12Q14500 433 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 HNRNPA1L2Q32P51 320 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 PIK3R6Q5UE93 754 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 KRT39Q6A163 491 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 RFWD3Q6PCD5 774 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 ZNF605Q86T29 641 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 FAM186BQ8IYM0 893 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 OR2T34Q8NGX1 318 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 BAP1Q92560 729 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 IPO9Q96P70 1041 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 IRX2Q9BZI1 471 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 GDF3Q9NR23 364 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 ADAMTS1Q9UHI8 967 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 KNTC1P50748 2209 aa17.57■□□□□ 0.4
CACNB3-222ENST00000552465 HELZ2Q9BYK8 2649 aaKnown RBP17.57■□□□□ 0.4
CACNB3-222ENST00000552465 SETXQ7Z333 2677 aaKnown RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 A0A1W2PP55 124 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 MID1O15344 667 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 EPHA8P29322 1005 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 SLC6A4P31645 630 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 GTF2H1P32780 548 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 PSMC2P35998 433 aaKnown RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ARRB1P49407 418 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 CCR5P51681 352 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ST8SIA6P61647 398 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ADIGQ0VDE8 80 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 CST6Q15828 149 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 GOLGA7BQ2TAP0 167 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms