RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TRAV34A0A0B4J273 112 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 RNF103-CHMP3A0A140T963 221 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 LINC00854A0A1B0GVQ3 168 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 CTAGE9A4FU28 777 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 URADA6NGE7 173 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 ZNF839A8K0R7 811 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 PYCARD-AS1I3L0S3 204 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 M0QX08 132 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 SGK1O00141 431 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 RNF103O00237 685 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 PSMD14O00487 310 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 SCAMP1O15126 338 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 KLK10O43240 276 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 NRP2O60462 931 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 BCAS2O75934 225 aaPredicted RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 GCNT3O95395 438 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 PDHBP11177 359 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 KELP23276 732 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 NFKBIAP25963 317 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 APEX1P27695 318 aaKnown RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 ALDH18A1P54886 795 aaKnown RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 TGFB2P61812 414 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 CCNA1P78396 465 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 MRPS5P82675 430 aaKnown RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 NFATC3Q12968 1075 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 CAMK2DQ13557 499 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 SLC44A4Q53GD3 710 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 GLRA4Q5JXX5 417 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 TTC22Q5TAA0 569 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 DRICH1Q6PGQ1 229 aaPredicted RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 CRIP3Q6Q6R5 217 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 OTOAQ7RTW8 1153 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 KRT28Q7Z3Y7 464 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 BMP8AQ7Z5Y6 402 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 ADGRA1Q86SQ6 560 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 STK32CQ86UX6 486 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 GPR156Q8NFN8 814 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 CPT1CQ8TCG5 803 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 STAMQ92783 540 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 FER1L6-AS2Q96M78 137 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 TXN2Q99757 166 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 ZNF518BQ9C0D4 1074 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 KLHL4Q9C0H6 718 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 PCDHAC1Q9H158 963 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 ANO10Q9NW15 660 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 DDX43Q9NXZ2 648 aaKnown RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 CROTQ9UKG9 612 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 MED16Q9Y2X0 877 aa4.43□□□□□ -1.7
USP44-208ENST00000552440 CAB39Q9Y376 341 aaPredicted RBP4.43□□□□□ -1.7
USP44-208ENST00000552440 hCG_1809904A0A1W2PP81 198 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 A0A1W2PPE2 198 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 A0A1W2PR64 198 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PCDH17O14917 1159 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CUTAO60888 179 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ENO2P09104 434 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 TXNP10599 105 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ALADP13716 330 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MALP21145 153 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 BSGP35613 385 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ACVRL1P37023 503 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ACAA2P42765 397 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ATP5OP48047 213 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SLC6A9P48067 706 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LMAN1P49257 510 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SOX8P57073 446 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PTP4A2Q12974 167 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CAMK1Q14012 370 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 HSP90AA5PQ58FG0 334 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 C9orf152Q5JTZ5 239 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 RAP1GAP2Q684P5 730 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TRMT10BQ6PF06 316 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 USP17L6PQ6QN14 398 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ADCK1Q86TW2 530 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 FAM217AQ8IXS0 508 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CCDC105Q8IYK2 499 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 DCBLD1Q8N8Z6 715 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 DRAXINQ8NBI3 349 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 KIF18AQ8NI77 898 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IGDCC4Q8TDY8 1250 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CYFIP2Q96F07 1278 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 AGAP3Q96P47 875 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LENG8Q96PV6 779 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 PRAM1Q96QH2 718 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MRIQ9BWK5 157 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 BTBD2Q9BX70 525 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 OR10A5Q9H207 317 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MRPL44Q9H9J2 332 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 IL21RQ9HBE5 538 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PDE11AQ9HCR9 933 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ZNHIT6Q9NWK9 470 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 AATFQ9NY61 560 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP44-208ENST00000552440 RBPJLQ9UBG7 517 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 AJAP1Q9UKB5 411 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms