RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 OR52L2PQ8NGH6 319 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ETNPPLQ8TBG4 499 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 RNF31Q96EP0 1072 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 VPS50Q96JG6 964 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TTC14Q96N46 770 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 PRR25Q96S07 402 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 AP1M1Q9BXS5 423 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 RANBP17Q9H2T7 1088 aaKnown RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 MROH8Q9H579 483 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 SYNCQ9H7C4 482 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ZCCHC17Q9NP64 241 aaKnown RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 AKIP1Q9NQ31 210 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 THAP1Q9NVV9 213 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 KCND2Q9NZV8 630 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 SARDHQ9UL12 918 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 SH2B3Q9UQQ2 575 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NPEPPSL1A6NEC2 478 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 VWC2LB2RUY7 222 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 PSMD9O00233 223 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RNASET2O00584 256 aaKnown RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 AP3D1O14617 1153 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 CYP27B1O15528 508 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 LPXNO60711 386 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NCR1O76036 304 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 TJP3O95049 919 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 KAT7O95251 611 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 METTL18O95568 372 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 PLATP00750 562 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 FESP07332 822 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RHOP08100 348 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NR2F1P10589 423 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 LYL1P12980 280 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 COMTP21964 271 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 BSGP35613 385 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ARL3P36405 182 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 BMPR1AP36894 532 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 IGHMBP2P38935 993 aaKnown RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RAP1GAPP47736 663 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NLRP5P59047 1200 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 MC1RQ01726 317 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ROR1Q01973 937 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ITIH3Q06033 890 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RESTQ13127 1097 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 CBFBQ13951 182 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RRP1BQ14684 758 aaKnown RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 WTAPQ15007 396 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 RILPL1Q5EBL4 403 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 MFSD4BQ5TF39 518 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 OGFOD2Q6N063 350 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SLC22A25Q6T423 547 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 TMCO3Q6UWJ1 677 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 DPY19L3Q6ZPD9 716 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ADGRG6Q86SQ4 1221 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 TMPRSS6Q8IU80 811 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 PNPLA1Q8N8W4 532 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 GPATCH11Q8N954 259 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 MYCBPAPQ8TBZ2 947 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 Q8TCH9 128 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 R3HDM4Q96D70 268 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 FAM120BQ96EK7 910 aaKnown RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 CD180Q99467 661 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SLF1Q9BQI6 1058 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 TXLNGYQ9BZA5 131 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 CTDSP1Q9GZU7 261 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 CLPBQ9H078 707 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 KLC2Q9H0B6 622 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 VEZTQ9HBM0 779 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SH3GLB2Q9NR46 395 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 PCDHB16Q9NRJ7 776 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 HCFC1R1Q9NWW0 138 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 HDAC6Q9UBN7 1215 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SUFUQ9UMX1 484 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NOX1Q9Y5S8 564 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 SNX8Q9Y5X2 465 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 LYVE1Q9Y5Y7 322 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 ADGRA2Q96PE1 1338 aa4.42□□□□□ -1.7
LSM6P2-201ENST00000552208 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 C3orf70A6NLC5 250 aaPredicted RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 TMEM232C9JQI7 657 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 MASP2O00187 686 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 VILLO15195 856 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 NUAK1O60285 661 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 DKC1O60832 514 aaKnown RBP eCLIP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CDKL5O76039 1030 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 STARD3NLO95772 234 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CSH1P0DML2 217 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CSH2P0DML3 217 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CREB1P16220 341 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms