RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GGA2Q9UJY4 613 aa15.96■□□□□ 0.15
CACNB3-220ENST00000551716 HEMK1Q9Y5R4 338 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-220ENST00000551716 TMEM131Q92545 1883 aa15.96■□□□□ 0.15
CACNB3-220ENST00000551716 SLC12A8A0AV02 714 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 PYCARD-AS1I3L0S3 204 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 CLIC2O15247 247 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 C4BPAP04003 597 aaKnown RBP15.95■□□□□ 0.14
CACNB3-220ENST00000551716 PABPC1P11940 636 aaKnown RBP15.95■□□□□ 0.14
CACNB3-220ENST00000551716 NUDT1P36639 197 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 GABREP78334 506 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 ASIC1P78348 528 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 AMPD3Q01432 767 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 XKR5Q6UX68 686 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 EPM2AIP1Q7L775 607 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-220ENST00000551716 KANSL1Q7Z3B3 1105 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 PRICKLE2Q7Z3G6 844 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 NT5C1AQ9BXI3 368 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 DUSP16Q9BY84 665 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 GZF1Q9H116 711 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-220ENST00000551716 NEUROG2Q9H2A3 272 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 EBF2Q9HAK2 575 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 FBXO2Q9UK22 296 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-220ENST00000551716 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
CACNB3-220ENST00000551716 UBE4BO95155 1302 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 EXOC3O60645 756 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 RNASEH2AO75792 299 aaKnown RBP15.94■□□□□ 0.14
CACNB3-220ENST00000551716 MPOP05164 745 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 DAB2P98082 770 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 KCNJ12Q14500 433 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 ARID5BQ14865 1188 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 TRIP4Q15650 581 aaPredicted RBP15.94■□□□□ 0.14
CACNB3-220ENST00000551716 CST6Q15828 149 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 MPP7Q5T2T1 576 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 ADGRF1Q5T601 910 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 C12orf56Q8IXR9 622 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 KDM1BQ8NB78 822 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 UBXN6Q9BZV1 441 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 STOML2Q9UJZ1 356 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 MYH10P35580 1976 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 PIEZO2Q9H5I5 2752 aa15.94■□□□□ 0.14
CACNB3-220ENST00000551716 PTPN13Q12923 2485 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 K7ENP7 123 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 SIGLEC6O43699 453 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 USP12O75317 370 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 KIF20AO95235 890 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 LATS1O95835 1130 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 GOT1P17174 413 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 HNRNPA1L2Q32P51 320 aaKnown RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 KMT5BQ4FZB7 885 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 SGO2Q562F6 1265 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 CDCP2Q5VXM1 449 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 NAPEPLDQ6IQ20 393 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 INO80CQ6PI98 192 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 IGF2-ASQ6U949 168 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 SND1Q7KZF4 910 aaKnown RBP eCLIP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 PRPF39Q86UA1 669 aaKnown RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 GOLGA5Q8TBA6 731 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 PARD3BQ8TEW8 1205 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 HPS3Q969F9 1004 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 GRAMD1AQ96CP6 724 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 CLIC6Q96NY7 704 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 OLA1Q9NTK5 396 aaKnown RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 EVA1BQ9NVM1 165 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 TFIP11Q9UBB9 837 aaKnown RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 HMGXB4Q9UGU5 601 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 HBS1LQ9Y450 684 aaKnown RBP15.93■□□□□ 0.14
CACNB3-220ENST00000551716 PCDHB1Q9Y5F3 818 aa15.93■□□□□ 0.14
CACNB3-220ENST00000551716 A0A1W2PP55 124 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 TARSL2A2RTX5 802 aaKnown RBP15.92■□□□□ 0.14
CACNB3-220ENST00000551716 C10orf142B7Z368 130 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 MID1O15344 667 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 OPA1O60313 960 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 ASLP04424 464 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 RBMS1P29558 406 aaKnown RBP15.92■□□□□ 0.14
CACNB3-220ENST00000551716 SLC8A1P32418 973 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 YWHAGP61981 247 aaKnown RBP eCLIP15.92■□□□□ 0.14
CACNB3-220ENST00000551716 INCA1Q0VD86 236 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 FAM26FQ5R3K3 315 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 TTC17Q96AE7 1141 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 ABCG4Q9H172 646 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 CYP3A43Q9HB55 503 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 DMTF1Q9Y222 760 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 MYLKQ15746 1914 aa15.92■□□□□ 0.14
CACNB3-220ENST00000551716 LRRIQ3A6PVS8 624 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-220ENST00000551716 WNT9AO14904 365 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 LATO43561 262 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 SIN3BO75182 1162 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 VNN1O95497 513 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 ASS1P00966 412 aaKnown RBP15.91■□□□□ 0.14
CACNB3-220ENST00000551716 GP1BAP07359 652 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 C5AR1P21730 350 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 ASPAP45381 313 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 CASP4P49662 377 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 SLC8A3P57103 927 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 STAT4Q14765 748 aa15.91■□□□□ 0.14
CACNB3-220ENST00000551716 SPATS2Q86XZ4 545 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms