RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 FAM9BQ8IZU0 186 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 SRFBP1Q8NEF9 429 aaKnown RBP6.28□□□□□ -1.4
HCFC2-204ENST00000550335 ABHD11Q8NFV4 315 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 ASB10Q8WXI3 467 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 MYEOVQ96EZ4 313 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 BDH2Q9BUT1 245 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
HCFC2-204ENST00000550335 GHITMQ9H3K2 345 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 CDCP1Q9H5V8 836 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 PARD6AQ9NPB6 346 aa6.28□□□□□ -1.4
HCFC2-204ENST00000550335 AURKAIP1Q9NWT8 199 aaPredicted RBP6.28□□□□□ -1.4
HCFC2-204ENST00000550335 RSF1Q96T23 1441 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-204ENST00000550335 QSOX1O00391 747 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TMCC2O75069 709 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TMEM63AO94886 807 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 KAT7O95251 611 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 ITGB3P05106 788 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 SPARCP09486 303 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 MAPK4P31152 587 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 AGTR2P50052 363 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 ARHGAP8P85298 464 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 SLC25A3Q00325 362 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 PSG6Q00889 435 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 ALKBH1Q13686 389 aaKnown RBP6.27□□□□□ -1.41
HCFC2-204ENST00000550335 GPR162Q16538 588 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 MEA1Q16626 185 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 NRN1LQ496H8 165 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 KAZNQ674X7 775 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TTLL5Q6EMB2 1281 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TMCO3Q6UWJ1 677 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TMTC2Q8N394 836 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 LNX2Q8N448 690 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 RFWD2Q8NHY2 731 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 RSRC1Q96IZ7 334 aaKnown RBP6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TREX2Q9BQ50 279 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-204ENST00000550335 HDHD5Q9BXW7 423 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 SYNPO2LQ9H987 977 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 CD248Q9HCU0 757 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 DIAPH3Q9NSV4 1193 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 KCTD5Q9NXV2 234 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TAS2R10Q9NYW0 307 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 KLQ9UEF7 1012 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 VPS28Q9UK41 221 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 ST3GAL5Q9UNP4 418 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 PSAT1Q9Y617 370 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 PIAS3Q9Y6X2 628 aa6.27□□□□□ -1.41
HCFC2-204ENST00000550335 TDRD9Q8NDG6 1382 aaKnown RBP6.27□□□□□ -1.41
HCFC2-204ENST00000550335 SCRIBQ14160 1630 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 CENPVL1A0A0U1RR11 272 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 TMEM200CA6NKL6 621 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 C3orf70A6NLC5 250 aaPredicted RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 DBX1A6NMT0 343 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 AHCYL1O43865 530 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 EBLN1P0CF75 366 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ALOX12P18054 663 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 FPR3P25089 353 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 NFKBIAP25963 317 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 AVPR2P30518 371 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ACTN2P35609 894 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 RAD52P43351 418 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 SELENOPP49908 381 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 LMAN2Q12907 356 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 MAMLD1Q13495 774 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 EIF4A2Q14240 407 aaKnown RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 RILPL1Q5EBL4 403 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 PCID2Q5JVF3 399 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 SH2D4BQ5SQS7 431 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 KLHL24Q6TFL4 600 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 KYAT3Q6YP21 454 aaKnown RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 C12orf76Q8N812 135 aaPredicted RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ZNF366Q8N895 744 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 LSM14AQ8ND56 463 aaKnown RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 NFKBIDQ8NI38 313 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ZCCHC10Q8TBK6 192 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 METTL6Q8TCB7 284 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 NOC3LQ8WTT2 800 aaKnown RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 AKAP1Q92667 903 aaKnown RBP eCLIP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 RFKQ969G6 155 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ELP4Q96EB1 424 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 PBKQ96KB5 322 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 HS6ST2Q96MM7 605 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 TEPSINQ96N21 525 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 LENG8Q96PV6 779 aaPredicted RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 PLEKHG4BQ96PX9 1271 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 EYA3Q99504 573 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 HTATIP2Q9BUP3 242 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ADGRE3Q9BY15 652 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 CCDC68Q9H2F9 335 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 PRKRIP1Q9H875 184 aaPredicted RBP6.26□□□□□ -1.41
HCFC2-204ENST00000550335 RXFP3Q9NSD7 469 aa6.26□□□□□ -1.41
HCFC2-204ENST00000550335 ABHD10Q9NUJ1 306 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms