RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 C5orf22Q49AR2 442 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 RABGAP1LQ5R372 815 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 FAM72AQ5TYM5 149 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 TTC39BQ5VTQ0 682 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 FAM72DQ6L9T8 149 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 DRICH1Q6PGQ1 229 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 Q6ZNB5 142 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 CHSY1Q86X52 802 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 FAM72BQ86X60 149 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 DENND1CQ8IV53 801 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 ITFG1Q8TB96 612 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 P3H4Q92791 437 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 LRCH3Q96II8 777 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 NECTIN4Q96NY8 510 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 AP1M1Q9BXS5 423 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 ZYG11BQ9C0D3 744 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 S1PR5Q9H228 398 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 LRRC19Q9H756 370 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 CFAP97Q9P2B7 532 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 FEZ2Q9UHY8 353 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 XPO7Q9UIA9 1087 aaKnown RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 AGO1Q9UL18 857 aaKnown RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 ZFP37Q9Y6Q3 630 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 DRGXA6NNA5 263 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 WASH4PA8MWX3 477 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 LEFTY2O00292 366 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 NRG2O14511 850 aaPredicted RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 DCLK1O15075 740 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 TBX10O75333 385 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 KLKB1P03952 638 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 RHOQP17081 205 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 ERCC2P18074 760 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 TACR2P21452 398 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 FNTAP49354 379 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 PAFAH1B3Q15102 231 aaKnown RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 RAP1GAP2Q684P5 730 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 CCDC70Q6NSX1 233 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 RWDD4Q6NW29 188 aaKnown RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 TMCO3Q6UWJ1 677 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 NPAS3Q8IXF0 933 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 FAM217AQ8IXS0 508 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 ZNF683Q8IZ20 524 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 MMGT1Q8N4V1 131 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 CELF5Q8N6W0 485 aaKnown RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 PLD5Q8N7P1 536 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 PRELID2Q8N945 189 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 ADAMTS19Q8TE59 1207 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 SH3RF2Q8TEC5 729 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 USP13Q92995 863 aaPredicted RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 MSLNLQ96KJ4 702 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 HERPUD2Q9BSE4 406 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 MAGEB5Q9BZ81 275 aa17.94■□□□□ 0.46
LETMD1-220ENST00000549686 RBM12Q9NTZ6 932 aaKnown RBP17.94■□□□□ 0.46
LETMD1-220ENST00000549686 TRANK1O15050 2925 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 TCRBV7S2A1N4TA0A589 114 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 TYW5A2RUC4 315 aaKnown RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 EFCAB8A8MWE9 144 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 GREM1O60565 184 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 AMPD1P23109 780 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 CHKAP35790 457 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 DYNLT1P63172 113 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 LMNB2Q03252 620 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 USP4Q13107 963 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 LLGL1Q15334 1064 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 FAM133BQ5BKY9 247 aaKnown RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 NADSYN1Q6IA69 706 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 FBXL22Q6P050 247 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 ADAT2Q7Z6V5 191 aaKnown RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 CPXM2Q8N436 756 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 RTL3Q8N8U3 475 aaKnown RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 ING5Q8WYH8 240 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 MAGOHBQ96A72 148 aaKnown RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 E2F7Q96AV8 911 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 RPRD1AQ96P16 312 aaPredicted RBP17.93■□□□□ 0.46
LETMD1-220ENST00000549686 TRPV4Q9HBA0 871 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 OBP2AQ9NY56 170 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 TBC1D14Q9P2M4 693 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 CDH7Q9ULB5 785 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 VANGL2Q9ULK5 521 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 SNX10Q9Y5X0 201 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
LETMD1-220ENST00000549686 ANAPC1Q9H1A4 1944 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 SLC9A3R1O14745 358 aaPredicted RBP17.92■□□□□ 0.46
LETMD1-220ENST00000549686 MCF2LO15068 1137 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 NCAM2O15394 837 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 LTBRP36941 435 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 MAPKAPK2P49137 400 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 ZXDBP98169 803 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 ADCY2Q08462 1091 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 C2orf54Q08AI8 447 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 XRCC4Q13426 336 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 GLE1Q53GS7 698 aaKnown RBP17.92■□□□□ 0.46
LETMD1-220ENST00000549686 NCBP2-AS2Q69YL0 99 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 EP400NLQ6ZTU2 488 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 GET4Q7L5D6 327 aaPredicted RBP17.92■□□□□ 0.46
LETMD1-220ENST00000549686 C14orf80Q86SX3 495 aa17.92■□□□□ 0.46
LETMD1-220ENST00000549686 ARID3BQ8IVW6 561 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms