RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FHOD3Q2V2M9 1422 aa4.61□□□□□ -1.67
PTCH1-216ENST00000548379 MAGI2Q86UL8 1455 aa4.61□□□□□ -1.67
PTCH1-216ENST00000548379 TCRBV5S1A1TA0A578 114 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 SAC3D1A6NKF1 404 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 C3orf70A6NLC5 250 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 H7C1Q1 480 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 HNRNPRO43390 633 aaKnown RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 KRT38O76015 456 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 KAT7O95251 611 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 MT-CO3P00414 261 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 RXRAP19793 462 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 PLA2G5P39877 138 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 RBM5P52756 815 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 CACNA2D1P54289 1103 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 TAS2R50P59544 299 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 UBE3AQ05086 875 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 TBX2Q13207 712 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 CBFBQ13951 182 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 ZXDCQ2QGD7 858 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 ZNF484Q5JVG2 852 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 ANKRD40Q6AI12 368 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 WDR93Q6P2C0 686 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 KYAT3Q6YP21 454 aaKnown RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 GRASPQ7Z6J2 395 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 RASAL3Q86YV0 1011 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 PTGR2Q8N8N7 351 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 TEX19Q8NA77 164 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 NAXEQ8NCW5 288 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 CEP70Q8NHQ1 597 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 MAFAQ8NHW3 353 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-216ENST00000548379 MACROD1Q9BQ69 325 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 REEP2Q9BRK0 252 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 CIPCQ9C0C6 399 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 PLEKHA2Q9HB19 425 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 ADAM21Q9UKJ8 722 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 RAB21Q9UL25 225 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 SLC12A4Q9UP95 1085 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 PCDHA10Q9Y5I2 948 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 SCAPERQ9BY12 1400 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 YEATS2Q9ULM3 1422 aa4.6□□□□□ -1.67
PTCH1-216ENST00000548379 PRRT4C9JH25 899 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 KIF21BO75037 1637 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 WDHD1O75717 1129 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-216ENST00000548379 GCP02774 474 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 GRK5P34947 590 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 BUD31P41223 144 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-216ENST00000548379 RCAN1P53805 252 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 PDCLQ13371 301 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 GAB1Q13480 694 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 CTXN3Q4LDR2 81 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 UHRF1BP1Q6BDS2 1440 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 CEP85Q6P2H3 762 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 CLEC4CQ8WTT0 213 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-216ENST00000548379 UROC1Q96N76 676 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 PIGSQ96S52 555 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 HERC2P3Q9BVR0 1158 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 GATA5Q9BWX5 397 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-216ENST00000548379 USP29Q9HBJ7 922 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 NOD2Q9HC29 1040 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 SLC22A11Q9NSA0 550 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 SLC17A6Q9P2U8 582 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 TMEM98Q9Y2Y6 226 aa4.59□□□□□ -1.67
PTCH1-216ENST00000548379 COPG1Q9Y678 874 aaKnown RBP4.59□□□□□ -1.67
PTCH1-216ENST00000548379 EFCAB5A4FU69 1503 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ZFYVE16Q7Z3T8 1539 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 C9orf84Q5VXU9 1444 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3DA0A087WVF3 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3IA0A087WXS9 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3EA0A087X179 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 A0A087X1B8 175 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3KA0A087X1G2 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 VWA3AA6NCI4 1184 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3BA6NDS4 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3FA6NER0 549 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 AGAP5A6NIR3 686 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3LB9A6J9 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 BTBD19C9JJ37 291 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 STX16-NPEPL1H3BU86 382 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 J3KRW8 73 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 PRYO14603 147 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 STX16O14662 325 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 FYB1O15117 783 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 SEPT4O43236 478 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 FZD7O75084 574 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 CSF1P09603 554 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3HP0C7X1 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 C6P13671 934 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ACP5P13686 325 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 CHN1P15882 459 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 NDUFS1P28331 727 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 HOXD12P35452 270 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 DDIT3P35638 169 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ACVRL1P37023 503 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF84P51523 738 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 COPB1P53618 953 aaKnown RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 WDR5P61964 334 aaKnown RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 HOXA4Q00056 320 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms