RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 CDR2LQ86X02 465 aaPredicted RBP10.18□□□□□ -0.78
CDK4-205ENST00000547853 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 DAW1Q8N136 415 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 AGGF1Q8N302 714 aaeCLIP10.18□□□□□ -0.78
CDK4-205ENST00000547853 FBXL13Q8NEE6 735 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 KCNN1Q92952 543 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 KLHL29Q96CT2 875 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 ZC3H10Q96K80 434 aaKnown RBP10.18□□□□□ -0.78
CDK4-205ENST00000547853 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 CORO1BQ9BR76 489 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 CXCL16Q9H2A7 254 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 ECT2Q9H8V3 914 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 MRPL47Q9HD33 250 aaKnown RBP10.18□□□□□ -0.78
CDK4-205ENST00000547853 SSU72Q9NP77 194 aaKnown RBP10.18□□□□□ -0.78
CDK4-205ENST00000547853 CTNNAL1Q9UBT7 734 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 FETUBQ9UGM5 382 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 BAIAP2L1Q9UHR4 511 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 ANAPC5Q9UJX4 755 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 NEUROG3Q9Y4Z2 214 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 PPME1Q9Y570 386 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 CEP83Q9Y592 693 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 BACE2Q9Y5Z0 518 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
CDK4-205ENST00000547853 CCDC163A0A0D9SF12 145 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 MYBPHLA2RUH7 354 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 C4orf47A7E2U8 309 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 TMEM189-UBE2V1I3L0A0 370 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 INO80B-WBP1J3KQ70 363 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 SMAPO00193 183 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 DCTN3O75935 186 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 LRG1P02750 347 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PTPN2P17706 415 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 CSRP1P21291 193 aaKnown RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 GARTP22102 1010 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 ALDH3A1P30838 453 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 GCLMP48507 274 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PXNP49023 591 aaPredicted RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 RARRES1P49788 294 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 CLNS1AP54105 237 aaKnown RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 FCHO2Q0JRZ9 810 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 CAPSQ13938 189 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PLK5Q496M5 336 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 CMPK2Q5EBM0 449 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 SLC27A1Q6PCB7 646 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 DRICH1Q6PGQ1 229 aaPredicted RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 DNAAF5Q86Y56 855 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 RHOT1Q8IXI2 618 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 ZSCAN18Q8TBC5 510 aaPredicted RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 ZNF398Q8TD17 642 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 INPP5DQ92835 1189 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 CEP170P1Q96L14 293 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 TMEM237Q96Q45 408 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 TUBB6Q9BUF5 446 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 DCLK3Q9C098 648 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 C15orf41Q9Y2V0 281 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 STARD13Q9Y3M8 1113 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 GPSM3Q9Y4H4 160 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 INSL5Q9Y5Q6 135 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 ZNF638Q14966 1978 aaKnown RBP10.17□□□□□ -0.78
CDK4-205ENST00000547853 ADAMTS9Q9P2N4 1935 aa10.17□□□□□ -0.78
CDK4-205ENST00000547853 PLXNB3Q9ULL4 1909 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 SMIM23A6NLE4 172 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 HEPACAM2A8MVW5 462 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 ABLIM1O14639 778 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 PRPF4O43172 522 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDK4-205ENST00000547853 HYAL3O43820 417 aaPredicted RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 ATP2C2O75185 946 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 PROSCO94903 275 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 UBOX5O94941 541 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 CAPNS1P04632 268 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 PRKCBP05771 671 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 CLTAP09496 248 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 CEACAM1P13688 526 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 BRAFP15056 766 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 TKTP29401 623 aaKnown RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 MARCKSL1P49006 195 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 EPHA5P54756 1037 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 MCL1Q07820 350 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 SNRNP35Q16560 246 aaKnown RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 SPRED3Q2MJR0 410 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 ZC3H12AQ5D1E8 599 aaKnown RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 C1orf220Q5T0J3 134 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 NUGGCQ68CJ6 796 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 SLC8B1Q6J4K2 584 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 VSTM1Q6UX27 236 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 CD300LGQ6UXG3 332 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 PDZD4Q76G19 769 aaPredicted RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 RALGPS2Q86X27 583 aaPredicted RBP10.16□□□□□ -0.78
CDK4-205ENST00000547853 PROSER1Q86XN7 944 aa10.16□□□□□ -0.78
CDK4-205ENST00000547853 MFSD6LQ8IWD5 586 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms