RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GPR78Q96P69 363 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 STARD7Q9NQZ5 370 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 THSD1Q9NS62 852 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 PCDHA7Q9UN72 937 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 EMSYQ7Z589 1322 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 KIR2DS5A0A0G2JLQ3 304 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 FAM234BA2RU67 622 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 KIR2DS3K7RE56 304 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 PMM2O15305 246 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 PRPF4O43172 522 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC38-204ENST00000546816 NCK2O43639 380 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 KAT7O95251 611 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 SGPL1O95470 568 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 AKR1A1P14550 325 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 IDEP14735 1019 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 SLC8A1P32418 973 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 NSUN2Q08J23 767 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC38-204ENST00000546816 IFIT5Q13325 482 aaKnown RBP4.75□□□□□ -1.65
CCDC38-204ENST00000546816 PMS2P11Q13670 270 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 SMTNL2Q2TAL5 461 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 PDXDC1Q6P996 788 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 DHRS13Q6UX07 377 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 FBXL14Q8N1E6 418 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 TXLNBQ8N3L3 684 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 TMEM199Q8N511 208 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 IQCF1Q8N6M8 205 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 KAT2BQ92831 832 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 LMLNQ96KR4 655 aa4.75□□□□□ -1.65
CCDC38-204ENST00000546816 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
CCDC38-204ENST00000546816 EIF2AQ9BY44 585 aaKnown RBP4.75□□□□□ -1.65
CCDC38-204ENST00000546816 EVPLQ92817 2033 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 GXYLT2A0PJZ3 443 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 NPC1O15118 1278 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 TAF5LO75529 589 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 FGF18O76093 207 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 PARNO95453 639 aaKnown RBP4.74□□□□□ -1.65
CCDC38-204ENST00000546816 WNT1P04628 370 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 SRGAP2BP0DMP2 458 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 FGF3P11487 239 aaPredicted RBP4.74□□□□□ -1.65
CCDC38-204ENST00000546816 TRIM27P14373 513 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 PTGR1Q14914 329 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 SLC35G1Q2M3R5 365 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 P3H1Q32P28 736 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 ANXA2RQ3ZCQ2 193 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 GLE1Q53GS7 698 aaKnown RBP4.74□□□□□ -1.65
CCDC38-204ENST00000546816 FAM209BQ5JX69 171 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 PIK3CD-AS1Q5SR53 167 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 C9orf50Q5SZB4 431 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 LIPMQ5VYY2 423 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 NUGGCQ68CJ6 796 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 GSG1LQ6UXU4 331 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 SKAP1Q86WV1 359 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 SPATA2LQ8IUW3 424 aaPredicted RBP4.74□□□□□ -1.65
CCDC38-204ENST00000546816 ZFPM2Q8WW38 1151 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 BRI3BPQ8WY22 251 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 DNASE2BQ8WZ79 361 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 NR4A3Q92570 626 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 NPIPB3Q92617 1050 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 EME1Q96AY2 570 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 PAAF1Q9BRP4 392 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCDC38-204ENST00000546816 DTNAQ9Y4J8 743 aa4.74□□□□□ -1.65
CCDC38-204ENST00000546816 J3KTA2 159 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ACOT8O14734 319 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ZC3H11AO75152 810 aaKnown RBP eCLIP4.73□□□□□ -1.65
CCDC38-204ENST00000546816 RBM23Q86U06 439 aaKnown RBP4.73□□□□□ -1.65
CCDC38-204ENST00000546816 EXD3Q8N9H8 876 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 SLC22A17Q8WUG5 538 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 NUDCD2Q8WVJ2 157 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ATP2A3Q93084 1043 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ZNF347Q96SE7 839 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 EIF3CQ99613 913 aaKnown RBP4.73□□□□□ -1.65
CCDC38-204ENST00000546816 TRIM2Q9C040 744 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ERVK-5Q9HDB9 667 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 UTS2RQ9UKP6 389 aa4.73□□□□□ -1.65
CCDC38-204ENST00000546816 ZNF335Q9H4Z2 1342 aaPredicted RBP4.72□□□□□ -1.65
CCDC38-204ENST00000546816 A6NNC1 897 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 PPP6R2O75170 966 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 ITGA5P08648 1049 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 CHRNB1P11230 501 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 TNFSF4P23510 183 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 HOXA11P31270 313 aaPredicted RBP4.72□□□□□ -1.65
CCDC38-204ENST00000546816 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 LTBQ06643 244 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 KEAP1Q14145 624 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 DLGAP5Q15398 846 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 KIAA1755Q5JYT7 1200 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 KRT27Q7Z3Y8 459 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 DPP9Q86TI2 863 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 CUZD1Q86UP6 607 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 RASGRP3Q8IV61 690 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 PJA1Q8NG27 643 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 PMM1Q92871 262 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 NEUROG1Q92886 237 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 MCRS1Q96EZ8 462 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 C8orf48Q96LL4 319 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 RBM38Q9H0Z9 239 aaKnown RBP4.72□□□□□ -1.65
CCDC38-204ENST00000546816 KCNK9Q9NPC2 374 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms