RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 OGDHQ02218 1023 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 KDSRQ06136 332 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 RABGAP1LQ5R372 815 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 SH3PXD2AQ5TCZ1 1133 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 CCDC117Q8IWD4 279 aaPredicted RBP17.39■□□□□ 0.37
CCDC38-203ENST00000546803 CCDC170Q8IYT3 715 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 CTNNBL1Q8WYA6 563 aaPredicted RBP17.39■□□□□ 0.37
CCDC38-203ENST00000546803 EZH1Q92800 747 aaPredicted RBP17.39■□□□□ 0.37
CCDC38-203ENST00000546803 NTAN1Q96AB6 310 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 KCNH6Q9H252 994 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 K7EQS6 105 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 SGSHP51688 502 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 RPS24P62847 133 aaKnown RBP17.38■□□□□ 0.37
CCDC38-203ENST00000546803 MRPS21P82921 87 aaKnown RBP17.38■□□□□ 0.37
CCDC38-203ENST00000546803 MESP2Q0VG99 397 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 ACAP1Q15027 740 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 C10orf76Q5T2E6 689 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 FBXL22Q6P050 247 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 LRRC31Q6UY01 552 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 TMTC1Q8IUR5 882 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 SPEM1Q8N4L4 309 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 SIK2Q9H0K1 926 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 ANLNQ9NQW6 1124 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 STIM2Q9P246 746 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
CCDC38-203ENST00000546803 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 CHURC1-FNTBB4DL54 471 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 I6L893 689 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 TRIM24O15164 1050 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 RNF40O75150 1001 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 RNF8O76064 485 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 TMEM253P0C7T8 217 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 AIF1P55008 147 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 E2F5Q15329 346 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 C5orf22Q49AR2 442 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 HSF5Q4G112 596 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 ANKS1BQ7Z6G8 1248 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 C1orf210Q8IVY1 113 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 MFN1Q8IWA4 741 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 FIBINQ8TAL6 211 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 WFIKKN2Q8TEU8 576 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 USP33Q8TEY7 942 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 MYEOVQ96EZ4 313 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 RPRD1AQ96P16 312 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 NUP85Q9BW27 656 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 OSBPL2Q9H1P3 480 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 SPATA6Q9NWH7 488 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-203ENST00000546803 UVRAGQ9P2Y5 699 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 INTUQ9ULD6 942 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 VANGL2Q9ULK5 521 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 CLEC4EQ9ULY5 219 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 STARD13Q9Y3M8 1113 aa17.37■□□□□ 0.37
CCDC38-203ENST00000546803 F5P12259 2224 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 A0A1B0GVM2 712 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 TCAF2A6NFQ2 919 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 TIMM44O43615 452 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
CCDC38-203ENST00000546803 CCR3P51677 355 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 OXCT1P55809 520 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 NRG1Q02297 640 aaPredicted RBP17.36■□□□□ 0.37
CCDC38-203ENST00000546803 SCAPQ12770 1279 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 MTAPQ13126 283 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 CDH18Q13634 790 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 GAS6Q14393 721 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 PIGHQ14442 188 aaPredicted RBP17.36■□□□□ 0.37
CCDC38-203ENST00000546803 EIF4HQ15056 248 aaKnown RBP17.36■□□□□ 0.37
CCDC38-203ENST00000546803 RAB6CQ53S08 254 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 SCYL2Q6P3W7 929 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 Q6ZS52 159 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 SLFN11Q7Z7L1 901 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 CFAP52Q8N1V2 620 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 ACDQ96AP0 544 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 TRIM7Q9C029 511 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 RAB6CQ9H0N0 254 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 GRPEL1Q9HAV7 217 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 IP6K2Q9UHH9 426 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
CCDC38-203ENST00000546803 IGLV3-10A0A075B6K4 115 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 DRGXA6NNA5 263 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 MYO1FO00160 1098 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 LAMTOR5O43504 91 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 CLDN11O75508 207 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 LCA5LO95447 670 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 HLA-FP30511 346 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 KIR2DL1P43626 348 aaPredicted RBP17.35■□□□□ 0.37
CCDC38-203ENST00000546803 GSDMDP57764 484 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 ZNF252P-AS1Q0IIN9 211 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 SPA17Q15506 151 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 CHST9Q7L1S5 443 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 TRMT11Q7Z4G4 463 aaKnown RBP17.35■□□□□ 0.37
CCDC38-203ENST00000546803 KIAA0907Q7Z7F0 614 aaPredicted RBP17.35■□□□□ 0.37
CCDC38-203ENST00000546803 C14orf80Q86SX3 495 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 ZNF683Q8IZ20 524 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms