RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 VPS37AQ8NEZ2 397 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MAGED4Q96JG8 741 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 SPATA13Q96N96 652 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 RNF157Q96PX1 679 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 GPR63Q9BZJ6 419 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TMEM134Q9H6X4 195 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TBC1D13Q9NVG8 400 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 CCDC167Q9P0B6 97 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 PGK2P07205 417 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NR1H2P55055 460 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 DEPDC1Q5TB30 811 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 FAM83AQ86UY5 434 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 PALB2Q86YC2 1186 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 SEPHS2Q99611 448 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 APBA2Q99767 749 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 LMCD1Q9NZU5 365 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 C2orf81A6NN90 581 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 ZMPSTE24O75844 475 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 KRR1Q13601 381 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NEDD8Q15843 81 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NRF1Q16656 503 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 CROCCP3Q8IVE0 287 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 ATP6V0D2Q8N8Y2 350 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 ZCWPW1Q9H0M4 648 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 GRHL1Q9NZI5 618 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 CLUHO75153 1309 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 LACTBL1A8MY62 500 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 VAPBO95292 243 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 C6orf222P0C671 652 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 TGFB3P10600 412 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 C21orf59P57076 290 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SEMA4DQ92854 862 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 VPS33AQ96AX1 596 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SH3GL1Q99961 368 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 CSDE1O75534 798 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 ODC1P11926 461 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 DNAJB2P25686 324 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 NNMTP40261 264 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 OTUD3Q5T2D3 398 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 FBXW8Q8N3Y1 598 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 PRDM16Q9HAZ2 1276 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.411e-9■□□□□ 9.5
NPC1L1-204ENST00000546276 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 GLP2RO95838 553 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 GABRB2P47870 512 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 MSLNQ13421 630 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 VEPH1Q14D04 833 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 ZNF470Q6ECI4 717 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 PTAR1Q7Z6K3 402 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 TSPAN14Q8NG11 270 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 FAM136AQ96C01 138 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 CELF6Q96J87 481 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 CINPQ9BW66 212 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC12A4Q9UP95 1085 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 RGSL1A5PLK6 1076 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 TMEM114B3SHH9 223 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 TADA2AO75478 443 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 AKT1P31749 480 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 LRRC74AQ0VAA2 488 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 FRG1Q14331 258 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SNX17Q15036 470 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 CYP51A1Q16850 503 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 MECRQ9BV79 373 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 DENND2DQ9H6A0 471 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 DAPK2Q9UIK4 370 aa12.48□□□□□ -0.41
NPC1L1-204ENST00000546276 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms