RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 FAM124AQ86V42 546 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 AHI1Q8N157 1196 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 UBA3Q8TBC4 463 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 KAT5Q92993 513 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 SNX11Q9Y5W9 270 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 CETN3O15182 167 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 PMM2O15305 246 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 STX10O60499 249 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 SEMA4FO95754 770 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 CALCAP01258 141 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 VDRP11473 427 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 HARS2P49590 506 aaKnown RBP13.07□□□□□ -0.32
COPS7A-221ENST00000546229 AFF3P51826 1226 aaKnown RBP13.07□□□□□ -0.32
COPS7A-221ENST00000546229 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 ANKRD40Q6AI12 368 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 IL27RAQ6UWB1 636 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 TTC17Q96AE7 1141 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 SLC39A13Q96H72 371 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 FCRL2Q96LA5 508 aaPredicted RBP13.07□□□□□ -0.32
COPS7A-221ENST00000546229 RSPH9Q9H1X1 276 aaPredicted RBP13.07□□□□□ -0.32
COPS7A-221ENST00000546229 EBF2Q9HAK2 575 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 LRRC4Q9HBW1 653 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
COPS7A-221ENST00000546229 ITIH6Q6UXX5 1313 aa13.07□□□□□ -0.32
COPS7A-221ENST00000546229 PCDHGA12O60330 932 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 HSP90AA1P07900 732 aaKnown RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 PAEPP09466 180 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 ACADMP11310 421 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 E2F5Q15329 346 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 SHBQ15464 509 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 IRGQQ8WZA9 623 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 AZIN2Q96A70 460 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
COPS7A-221ENST00000546229 ANKRD6Q9Y2G4 727 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
COPS7A-221ENST00000546229 H0Y8X5 98 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 ACSL4O60488 711 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 IGLV3-25P01717 112 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 LTFP02788 710 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 WNT1P04628 370 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 CD19P15391 556 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 CD27P26842 260 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 RDXP35241 583 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 FMO5P49326 533 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 RGS7P49802 495 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 SLC8A3P57103 927 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 RPS24P62847 133 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 LRRC63Q05C16 580 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 NNTQ13423 1086 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 EIF4EBP2Q13542 120 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 SMAD1Q15797 465 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 HNRNPA1L2Q32P51 320 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 SOWAHCQ53LP3 525 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 SIX6OS1Q8N1H7 587 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 FIBINQ8TAL6 211 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 DQX1Q8TE96 717 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 RNF139Q8WU17 664 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 ERCC4Q92889 916 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 IGSF8Q969P0 613 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 NUCKS1Q9H1E3 243 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
COPS7A-221ENST00000546229 PCDHB9Q9Y5E1 797 aa13.05□□□□□ -0.32
COPS7A-221ENST00000546229 PIK3R2O00459 728 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 WNT9AO14904 365 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 IRAK2O43187 625 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 TBL1XO60907 577 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 SIN3BO75182 1162 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 LCP1P13796 627 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 BMP6P22004 513 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 TBXAS1P24557 533 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CSKP41240 450 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms