RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
YBX3-217ENST00000546164 AGPAT1Q99943 283 aa12.3□□□□□ -0.44
YBX3-217ENST00000546164 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
YBX3-217ENST00000546164 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
YBX3-217ENST00000546164 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
YBX3-217ENST00000546164 THAP10Q9P2Z0 257 aaPredicted RBP12.3□□□□□ -0.44
YBX3-217ENST00000546164 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 F9P00740 461 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 TACR2P21452 398 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 PRKCIP41743 596 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 NSFP46459 744 aaKnown RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 CXCR3P49682 368 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 ARID5AQ03989 594 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 NME3Q13232 169 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 SRSF5Q13243 272 aaKnown RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 BRMS1LQ5PSV4 323 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 TTC39BQ5VTQ0 682 aaPredicted RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 RAP1GAP2Q684P5 730 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 TMEM215Q68D42 235 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 TRNP1Q6NT89 227 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 ADIPOR2Q86V24 386 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 FIBINQ8TAL6 211 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
YBX3-217ENST00000546164 C11orf70Q9BRQ4 267 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 PIGVQ9NUD9 493 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 ABCB8Q9NUT2 735 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 ARHGEF38Q9NXL2 777 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 GGA2Q9UJY4 613 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 RAB23Q9ULC3 237 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
YBX3-217ENST00000546164 TCRBV21S2A2A0A5A6 115 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 LRRC53A6NM62 1247 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 F5H5T6 163 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 GOLGA8SH3BPF8 625 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 ENDOD1O94919 500 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
YBX3-217ENST00000546164 CALB1P05937 261 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 RETP07949 1114 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
YBX3-217ENST00000546164 SULT1E1P49888 294 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 UBASH3AP57075 661 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 RNASE9P60153 205 aaKnown RBP12.28□□□□□ -0.44
YBX3-217ENST00000546164 C5orf22Q49AR2 442 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 USP39Q53GS9 565 aaKnown RBP12.28□□□□□ -0.44
YBX3-217ENST00000546164 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
YBX3-217ENST00000546164 PPP1R2P3Q6NXS1 205 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 PRR23BQ6ZRT6 265 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 CEP68Q76N32 757 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 CHST9Q7L1S5 443 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 MON1BQ7L1V2 547 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 C3orf20Q8ND61 904 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 WFDC5Q8TCV5 224 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 RNF34Q969K3 372 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 IQCDQ96DY2 449 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 TBCBQ99426 244 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 NUP58Q9BVL2 599 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 CIPCQ9C0C6 399 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 ADAM22Q9P0K1 906 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 STON1Q9Y6Q2 735 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 CEP250Q9BV73 2442 aa12.28□□□□□ -0.44
YBX3-217ENST00000546164 SDK1Q7Z5N4 2213 aa12.27□□□□□ -0.44
YBX3-217ENST00000546164 SYNJ2BP-COX16A0A087WUM0 186 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 A0A1W2PQJ5 194 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 TCRBV5S1A1TA0A578 114 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 C2CD4BA6NLJ0 364 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 PAGE1O75459 146 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.45
YBX3-217ENST00000546164 CD70P32970 193 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 RDXP35241 583 aaKnown RBP12.27□□□□□ -0.45
YBX3-217ENST00000546164 P2RY2P41231 377 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 IL12RB1P42701 662 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 WASP42768 502 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 DEUP1Q05D60 604 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 LMAN2Q12907 356 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 CDH18Q13634 790 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 ZNF234Q14588 700 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 NFKBIBQ15653 356 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 ASIC2Q16515 512 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 RABGAP1LQ5R372 815 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 E4F1Q66K89 784 aaPredicted RBP12.27□□□□□ -0.45
YBX3-217ENST00000546164 MBLAC2Q68D91 279 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 KIAA1211LQ6NV74 962 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 FBXL22Q6P050 247 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.45
YBX3-217ENST00000546164 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.45
YBX3-217ENST00000546164 CFAP52Q8N1V2 620 aa12.27□□□□□ -0.45
YBX3-217ENST00000546164 TTC17Q96AE7 1141 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms