RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 MARK1Q9P0L2 795 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 GOLGA6L7A0A1B0GV03 622 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 E9PAM4 449 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ARNTLO00327 626 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 HOXC11O43248 304 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 FTCDO95954 541 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 KRT1P04264 644 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 CYP17A1P05093 508 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ADH5P11766 374 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 SRFP11831 508 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ARSAP15289 507 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 CTNNA1P35221 906 aaKnown RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 GGCXP38435 758 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ARL4AP40617 200 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 PFKPQ01813 784 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 SEMA3BQ13214 749 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 RUNX3Q13761 415 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 AUHQ13825 339 aaKnown RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 KRT81Q14533 505 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 PDK2Q15119 407 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 DHCR24Q15392 516 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 MPPE1Q53F39 396 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ODF2Q5BJF6 829 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 MPP7Q5T2T1 576 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 TRIM68Q6AZZ1 485 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 FBXL22Q6P050 247 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 RFWD3Q6PCD5 774 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 UBL4BQ8N7F7 174 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 CSGALNACT1Q8TDX6 532 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 TBC1D31Q96DN5 1066 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 KCTD15Q96SI1 283 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 LINC00597Q9H2U6 94 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 EBF3Q9H4W6 596 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 HPS4Q9NQG7 708 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 RCOR3Q9P2K3 495 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
PAAF1-216ENST00000546039 VANGL2Q9ULK5 521 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 DUSP12Q9UNI6 340 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 SORCS3Q9UPU3 1222 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 PCDHA3Q9Y5H8 950 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 F5P12259 2224 aa11.12□□□□□ -0.63
PAAF1-216ENST00000546039 IGLV3-10A0A075B6K4 115 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 A0A1B0GVM2 712 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TCAF2A6NFQ2 919 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF487B1APH4 448 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 H3BRJ5 948 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 EEF2KO00418 725 aaKnown RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 FGF10O15520 208 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 CREB3O43889 395 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TSPAN3O60637 253 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 LRIG2O94898 1065 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 PENKP01210 267 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TNNT1P13805 278 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 HOXC13P31276 330 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 CDH6P55285 790 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TPI1P60174 286 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 GAD2Q05329 585 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TNK2Q07912 1038 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 CA9Q16790 459 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 PPP6R3Q5H9R7 873 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 LY6G5CQ5SRR4 150 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TPGS1Q6ZTW0 290 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 C14orf80Q86SX3 495 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 MAP7D3Q8IWC1 876 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 KATNAL2Q8IYT4 538 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ADGRG2Q8IZP9 1017 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 GJD3Q8N144 294 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 PYROXD2Q8N2H3 581 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF557Q8N988 423 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 FAM71BQ8TC56 605 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 DDI1Q8WTU0 396 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 TMA16Q96EY4 203 aaKnown RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 HES6Q96HZ4 224 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 RBM41Q96IZ5 413 aaKnown RBP11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF670Q9BS34 389 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 BBS2Q9BXC9 721 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ZYG11BQ9C0D3 744 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 RETREG1Q9H6L5 497 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 SNX10Q9Y5X0 201 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 ATG2BQ96BY7 2078 aa11.11□□□□□ -0.63
PAAF1-216ENST00000546039 LRRD1A4D1F6 860 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 DRGXA6NNA5 263 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms