RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 STAU1O95793 577 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 SARNPP82979 210 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 TRMT5Q32P41 509 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 RABGAP1LQ5R372 815 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 SLC26A9Q7LBE3 791 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 DEFB106AQ8N104 65 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 NME8Q8N427 588 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 AGR3Q8TD06 166 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 APBB2Q92870 758 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 CCDC124Q96CT7 223 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 OLFM3Q96PB7 478 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 SORT1Q99523 831 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 MAN1C1Q9NR34 630 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 APOBEC2Q9Y235 224 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 SPTLC1O15269 473 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 SIN3BO75182 1162 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 CD1EP15812 388 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 ZFXP17010 805 aaPredicted RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 HOXA11P31270 313 aaPredicted RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 ARL4AP40617 200 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 GRM5P41594 1212 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 BAG6P46379 1132 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 ITGA9Q13797 1035 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 C6orf163Q5TEZ5 329 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 STEAP4Q687X5 459 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 RAB3IL1Q8TBN0 382 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 SCOCQ9UIL1 159 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 ANGPTL2Q9UKU9 493 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 SOX13Q9UN79 622 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 PTPRFP10586 1907 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 H3BRB1 525 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 PROCP04070 461 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 CYP2C8P10632 490 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 AOC1P19801 751 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 NCF2P19878 526 aaPredicted RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 TYK2P29597 1187 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 SULT1E1P49888 294 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 IDH3AP50213 366 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 PGGT1BP53609 377 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 BST2Q10589 180 aaKnown RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 USP4Q13107 963 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 DCAF6Q58WW2 860 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 FOXB2Q5VYV0 432 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 TAPT1Q6NXT6 567 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 LRRC8BQ6P9F7 803 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 C4orf22Q6V702 233 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 CCNJLQ8IV13 435 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
LDLR-204ENST00000545707 FCRL3Q96P31 734 aaPredicted RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.24■□□□□ 0.196e-8■□□□□ 8.2
LDLR-204ENST00000545707 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
LDLR-204ENST00000545707 GLRA3O75311 464 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 GNL1P36915 607 aaPredicted RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 NDUFV1P49821 464 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 TTLL12Q14166 644 aaPredicted RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 RAPH1Q70E73 1250 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 SULF1Q8IWU6 871 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 ZNF567Q8N184 647 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 PLD6Q8N2A8 252 aaKnown RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 CDKL2Q92772 493 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 GATA6Q92908 595 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 PRDM12Q9H4Q4 367 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 SETD4Q9NVD3 440 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 NDE1Q9NXR1 346 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 MORF4L1Q9UBU8 362 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 RPS6KL1Q9Y6S9 549 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 CLDN5O00501 218 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 TKTP29401 623 aaKnown RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 AP2B1P63010 937 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 NME3Q13232 169 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 HIC1Q14526 733 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 ZRSR2Q15696 482 aaKnown RBP16.23■□□□□ 0.19
LDLR-204ENST00000545707 DLG2Q15700 870 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 RNF111Q6ZNA4 994 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 PHTF2Q8N3S3 785 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 OR52K1Q8NGK4 314 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 TSC22D3Q99576 134 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 VCXQ9H320 206 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 CAB39LQ9H9S4 337 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 FZD10Q9ULW2 581 aa16.23■□□□□ 0.19
LDLR-204ENST00000545707 SERPINE1P05121 402 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms