RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 EPHB3P54753 998 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 NCALDP61601 193 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 DLG4P78352 724 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 ARCQ7LC44 396 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SPATA13Q96N96 652 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SETD4Q9NVD3 440 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CARNS1A5YM72 827 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SNX3O60493 162 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KRT20P35900 424 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 PIK3CGP48736 1102 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 FAM98BQ52LJ0 330 aaKnown RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CRELD2Q6UXH1 353 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 OR56A4Q8NGH8 313 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 UCMAQ8WVF2 138 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 UROC1Q96N76 676 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SLC25A23Q9BV35 468 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 RAD51BO15315 384 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 EPHX2P34913 555 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SOX6P35712 828 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 FMO1Q01740 532 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 FUT2Q10981 343 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 OTOAQ7RTW8 1153 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 PHF21AQ96BD5 680 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 TRAPPC9Q96Q05 1148 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 MORF4L1Q9UBU8 362 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 LCA5LO95447 670 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 TRUB2O95900 331 aaKnown RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 GSNP06396 782 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CCNG1P51959 295 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 SNX30Q5VWJ9 437 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 DHFR2Q86XF0 187 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 RASGEF1CQ8N431 466 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 GDPD5Q8WTR4 605 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 PRRG3Q9BZD7 231 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 VPS28Q9UK41 221 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 A0A1B0GW55 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DYTNA2CJ06 578 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 E5RJQ4 531 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L2P0CJ85 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L3P0CJ86 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L4P0CJ87 422 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L5P0CJ88 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L6P0CJ89 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4L7P0CJ90 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 GLRA2P23416 452 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TBCELQ5QJ74 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CELF3Q5SZQ8 465 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 LRRC74BQ6ZQY2 392 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CATSPERGQ6ZRH7 1159 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 LRRC49Q8IUZ0 686 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 STARD8Q92502 1023 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 XPNPEP3Q9NQH7 507 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TAS2R14Q9NYV8 317 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TAS2R13Q9NYV9 303 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DUX4Q9UBX2 424 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TRPV2Q9Y5S1 764 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 VCLP18206 1134 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ME2P23368 584 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 PURAQ00577 322 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 FBXO39Q8N4B4 442 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 SOCS4Q8WXH5 440 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 C18orf25Q96B23 403 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 BDH2Q9BUT1 245 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ENOPH1Q9UHY7 261 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 MYO5BQ9ULV0 1848 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 F8VP50 259 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 BTKQ06187 659 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 FASTKQ14296 549 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 SAMD4BQ5PRF9 694 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 IRF2BP2Q7Z5L9 587 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 PSTKQ8IV42 348 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 MFSD14AQ96MC6 490 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms