RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SLC22A17Q8WUG5 538 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 ABHD14AQ9BUJ0 271 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 HTATIP2Q9BUP3 242 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 PRDM16Q9HAZ2 1276 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 KCNK9Q9NPC2 374 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 CHPF2Q9P2E5 772 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 ANAPC4Q9UJX5 808 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 UBE2J1Q9Y385 318 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-224ENST00000545688 PNMA6EA0A0J9YXQ4 647 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 PODXLO00592 558 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 PPM1GO15355 546 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-224ENST00000545688 PPP6R2O75170 966 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 FGF18O76093 207 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 CHRNB1P11230 501 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 HOXB2P14652 356 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 SLC37A1P57057 533 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 CSHL1Q14406 222 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 C6orf10Q5SRN2 563 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 TTC30AQ86WT1 665 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 DDIASQ8IXT1 998 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 FAM47BQ8NA70 645 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 BRI3BPQ8WY22 251 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 ZNF566Q969W8 418 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 C8orf48Q96LL4 319 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 RIPOR3Q96MK2 946 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 ZNF347Q96SE7 839 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 DTNAQ9Y4J8 743 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 PCDHB7Q9Y5E2 793 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 CNTNAP2Q9UHC6 1331 aa5.36□□□□□ -1.55
SNHG1-224ENST00000545688 GTPBP1O00178 669 aaKnown RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 CNTN5O94779 1100 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 TBXAS1P24557 533 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 EEF1GP26641 437 aaKnown RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 POLD2P49005 469 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 P2RX3P56373 397 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 LONRF1Q17RB8 773 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 KIAA1755Q5JYT7 1200 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 UBAP2Q5T6F2 1119 aaKnown RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 TRAPPC11Q7Z392 1133 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 DPP9Q86TI2 863 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 PJA1Q8NG27 643 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 OR52N4Q8NGI2 321 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 B4GALNT2Q8NHY0 566 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 THOC3Q96J01 351 aaKnown RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 PAAF1Q9BRP4 392 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 WDR83Q9BRX9 315 aaKnown RBP5.35□□□□□ -1.55
SNHG1-224ENST00000545688 CA14Q9ULX7 337 aa5.35□□□□□ -1.55
SNHG1-224ENST00000545688 EIF4G1Q04637 1599 aaKnown RBP5.34□□□□□ -1.55
SNHG1-224ENST00000545688 DPPA5A6NC42 116 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 RASA4BC9J798 803 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 PCDH17O14917 1159 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 RASA4O43374 803 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 CIITAP33076 1130 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 TM4SF4P48230 202 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 GAD2Q05329 585 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 GPR162Q16538 588 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 ISM2Q6H9L7 571 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 LRIG3Q6UXM1 1119 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 FAR2Q96K12 515 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 EPS8L2Q9H6S3 715 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 FZD3Q9NPG1 666 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 HELLSQ9NRZ9 838 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 SLC8A2Q9UPR5 921 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 LAMP3Q9UQV4 416 aa5.34□□□□□ -1.55
SNHG1-224ENST00000545688 M0QYT0 321 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 RHODO00212 210 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 T-ENOLP0DO92 83 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 TGM2P21980 687 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 GRM4Q14833 912 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 RAB30Q15771 203 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 WDR93Q6P2C0 686 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 SLC39A5Q6ZMH5 540 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 SRFBP1Q8NEF9 429 aaKnown RBP5.33□□□□□ -1.56
SNHG1-224ENST00000545688 PARD3BQ8TEW8 1205 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 NECTIN3Q9NQS3 549 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNHG1-224ENST00000545688 WWOXQ9NZC7 414 aa5.33□□□□□ -1.56
SNHG1-224ENST00000545688 LACTBL1A8MY62 500 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 H0YGN5 161 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 KIF3BO15066 747 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 NKX2-8O15522 239 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 NTSR2O95665 410 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 CER1O95813 267 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 PEPDP12955 493 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 CDC25AP30304 524 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 ARRB2P32121 409 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 HSPA7P48741 367 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 PGGT1BP53609 377 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 SHC2P98077 582 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 AAK1Q2M2I8 961 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 MPEG1Q2M385 716 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 ANKRD40Q6AI12 368 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 ADGRF3Q8IZF5 1079 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 PAQR4Q8N4S7 273 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-224ENST00000545688 OR2C3Q8N628 320 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 TMEM174Q8WUU8 243 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 C18orf8Q96DM3 657 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms