RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 UBR7Q8N806 425 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 HASPINQ8TF76 798 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 IGSF8Q969P0 613 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 TRIM11Q96F44 468 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 KREMEN1Q96MU8 473 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 SLC46A1Q96NT5 459 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 MKRN2Q9H000 416 aaKnown RBP7.22□□□□□ -1.25
LDHA-223ENST00000545215 AGO4Q9HCK5 861 aaKnown RBP7.22□□□□□ -1.25
LDHA-223ENST00000545215 TRIM39Q9HCM9 518 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 GP6Q9HCN6 339 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 AGPAT5Q9NUQ2 364 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 CALCOCO1Q9P1Z2 691 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 CACNG4Q9UBN1 327 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 SNX11Q9Y5W9 270 aa7.22□□□□□ -1.25
LDHA-223ENST00000545215 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.25
LDHA-223ENST00000545215 ZFC3H1O60293 1989 aaKnown RBP7.21□□□□□ -1.25
LDHA-223ENST00000545215 A0A087WZ62 844 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ARHGAP10A1A4S6 786 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MEIS1O00470 390 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ADAM23O75077 832 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 DNAJC8O75937 253 aaPredicted RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 GCFC2P16383 781 aaKnown RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 DUSP3P51452 185 aaPredicted RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 RNF4P78317 190 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 KCNAB2Q13303 367 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MAP7Q14244 749 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 CT47A1Q5JQC4 288 aaPredicted RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 GPR158Q5T848 1215 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ANKRD34AQ69YU3 496 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ATL3Q6DD88 541 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MIS18BP1Q6P0N0 1132 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MOXD1Q6UVY6 613 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 RSRC2Q7L4I2 434 aaKnown RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 NIPA1Q7RTP0 329 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 NOSTRINQ8IVI9 506 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 CCDC60Q8IWA6 550 aaPredicted RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 TRIM59Q8IWR1 403 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MTMR9Q96QG7 549 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 FDXACB1Q9BRP7 624 aaPredicted RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 FUCA2Q9BTY2 467 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 ECT2Q9H8V3 914 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 ZNF302Q9NR11 478 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 TCEAL9Q9UHQ7 104 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 NOL7Q9UMY1 257 aaKnown RBP7.21□□□□□ -1.26
LDHA-223ENST00000545215 ENTPD4Q9Y227 616 aa7.21□□□□□ -1.26
LDHA-223ENST00000545215 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 RTTNQ86VV8 2226 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 MEI4A8MW99 385 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 CDRT15L2A8MXV6 281 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 FAM86B1E9PN63 330 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 H0Y8X5 98 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 KCNK3O14649 394 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 TACC2O95359 2948 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 BMP15O95972 392 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 CCNE2O96020 404 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 LDLRP01130 860 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 CYP3A4P08684 503 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 FAM86B2P0C5J1 330 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 HOXA11P31270 313 aaPredicted RBP7.2□□□□□ -1.26
LDHA-223ENST00000545215 PDGFRLQ15198 375 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 RILPL1Q5EBL4 403 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 SWSAP1Q6NVH7 229 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 TAOK1Q7L7X3 1001 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 TRMT1LQ7Z2T5 733 aaKnown RBP7.2□□□□□ -1.26
LDHA-223ENST00000545215 HEATR4Q86WZ0 1026 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 CPA6Q8N4T0 437 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 AIFM3Q96NN9 605 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 CEP89Q96ST8 783 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 TASP1Q9H6P5 420 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 ACSS3Q9H6R3 686 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 SSU72Q9NP77 194 aaKnown RBP7.2□□□□□ -1.26
LDHA-223ENST00000545215 CHMP5Q9NZZ3 219 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 SFMBT1Q9UHJ3 866 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 MAFFQ9ULX9 164 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 KCNJ14Q9UNX9 436 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 ANKRD6Q9Y2G4 727 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 IPPQ9Y573 584 aa7.2□□□□□ -1.26
LDHA-223ENST00000545215 MN1Q10571 1320 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 IGLV3-22A0A075B6J6 115 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 KIAA1324LA8MWY0 1029 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 BTBD18B2RXH4 712 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ALG1L2C9J202 215 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 DFNA5O60443 496 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 DLX3O60479 287 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ZSCAN22P10073 491 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 RBMS1P29558 406 aaKnown RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 DDIT3P35638 169 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 MLLT10P55197 1068 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 E2F1Q01094 437 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 SETQ01105 290 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 CYP4A11Q02928 519 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 GRIK3Q13003 919 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms