RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PSTPIP1O43586 416 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 SPOPO43791 374 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 TACR2P21452 398 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 CTNNA2P26232 953 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 GDI1P31150 447 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 L1CAMP32004 1257 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 CTNNA1P35221 906 aaKnown RBP13.53□□□□□ -0.24
DDX11-227ENST00000544652 IFNAR2P48551 515 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 ARSEP51690 589 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 DPYSL2Q16555 572 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 RAP1GAP2Q684P5 730 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 RNF43Q68DV7 783 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 ATP2A3Q93084 1043 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 MAGEB5Q9BZ81 275 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 SPHK2Q9NRA0 654 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 MARK1Q9P0L2 795 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 PPARGC1AQ9UBK2 798 aaKnown RBP13.53□□□□□ -0.24
DDX11-227ENST00000544652 OR12D3Q9UGF7 316 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 NEU3Q9UQ49 428 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 DRGXA6NNA5 263 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 NFATC1O95644 943 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 ASGR2P07307 311 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 HOXC13P31276 330 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 HTR7P34969 479 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 ZNF135P52742 658 aaPredicted RBP13.52□□□□□ -0.25
DDX11-227ENST00000544652 TDGQ13569 410 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 RUNX3Q13761 415 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 AUHQ13825 339 aaKnown RBP13.52□□□□□ -0.25
DDX11-227ENST00000544652 CA9Q16790 459 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 SMTNL2Q2TAL5 461 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 MPP7Q5T2T1 576 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 ASTLQ6HA08 431 aaPredicted RBP13.52□□□□□ -0.25
DDX11-227ENST00000544652 FBXL22Q6P050 247 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 PEX26Q7Z412 305 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 C14orf80Q86SX3 495 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 CHSY1Q86X52 802 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 VSIG1Q86XK7 387 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 PYROXD2Q8N2H3 581 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 TTC16Q8NEE8 873 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 TSC1Q92574 1164 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 IRF7Q92985 503 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 P2RY11Q96G91 374 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 HES6Q96HZ4 224 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 PRICKLE1Q96MT3 831 aaPredicted RBP13.52□□□□□ -0.25
DDX11-227ENST00000544652 ALS2CR12Q96Q35 445 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 SIK2Q9H0K1 926 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 SLC2A4RGQ9NR83 387 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 PCDHA3Q9Y5H8 950 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 SNX10Q9Y5X0 201 aa13.52□□□□□ -0.25
DDX11-227ENST00000544652 MUC22E2RYF6 1773 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 OTOL1A6NHN0 477 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 MIF4GDA9UHW6 222 aaKnown RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 E9PAM4 449 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 F5H5T6 163 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 FAM72CH0Y354 149 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 LRIG2O94898 1065 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 PENKP01210 267 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 CYP17A1P05093 508 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 SRFP11831 508 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 ARSAP15289 507 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 SSR1P43307 286 aaKnown RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 HCAR3P49019 387 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 PEX5P50542 639 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 SGSHP51688 502 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 PDK2Q15119 407 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 DHCR24Q15392 516 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 GAB4Q2WGN9 574 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 FAM72AQ5TYM5 149 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 TTC39BQ5VTQ0 682 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 FYB2Q5VWT5 728 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 FAM72DQ6L9T8 149 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 RFWD3Q6PCD5 774 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 FAM72BQ86X60 149 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 TMEM25Q86YD3 366 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX11-227ENST00000544652 KATNAL2Q8IYT4 538 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 LGI2Q8N0V4 545 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 KRT35Q92764 455 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 IGSF8Q969P0 613 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 EBF3Q9H4W6 596 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 RETREG1Q9H6L5 497 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms