RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CSGALNACT1	Q8TDX6	532 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TRIM63	Q969Q1	353 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	VOPP1	Q96AW1	172 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	GCC1	Q96CN9	775 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	P2RY11	Q96G91	374 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	GPR78	Q96P69	363 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	EFHD1	Q9BUP0	239 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	GATA5	Q9BWX5	397 aa	Predicted RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	ARL8B	Q9NVJ2	186 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	KCND3	Q9UK17	655 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	FEM1B	Q9UK73	627 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	MAFF	Q9ULX9	164 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	AGAP5	A6NIR3	686 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639		E7EVH7	732 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	RRH	O14718	337 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	TFRC	P02786	760 aa	Known RBP	4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	TK1	P04183	234 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	HSD3B1	P14060	373 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	IDUA	P35475	653 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	CCT5	P48643	541 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	MCM2	P49736	904 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	RCAN1	P53805	252 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	SLC37A1	P57057	533 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	RAPGEF1	Q13905	1077 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	FBXO47	Q5MNV8	452 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	SYT13	Q7L8C5	426 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	TFAP2D	Q7Z6R9	452 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	RFX6	Q8HWS3	928 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	FTSJ3	Q8IY81	847 aa	Known RBP	4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	CPXCR1	Q8N123	301 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	SRFBP1	Q8NEF9	429 aa	Known RBP	4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	CLEC4C	Q8WTT0	213 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	CELF1	Q92879	486 aa	Known RBP	4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	C5orf34	Q96MH7	638 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	NPAS1	Q99742	590 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	TMLHE	Q9NVH6	421 aa		4.76	□□□□□ -1.65
RAP1B-231	ENST00000544639	SPATA31A5	Q5VU36	1347 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	SPATA31A7	Q8IWB4	1347 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	KRT38	O76015	456 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	RNF8	O76064	485 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	TACR3	P29371	465 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	AARS	P49588	968 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	PPM1F	P49593	454 aa	Predicted RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	ACTR2	P61160	394 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	FOXF2	Q12947	444 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	PDCL	Q13371	301 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	BIRC3	Q13489	604 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	EFR3A	Q14156	821 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	DCTN1	Q14203	1278 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	GLE1	Q53GS7	698 aa	Known RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	TMEM88	Q6PEY1	159 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	ZNF354C	Q86Y25	554 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	ANKRD18A	Q8IVF6	992 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	HERC6	Q8IVU3	1022 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	ADGRF3	Q8IZF5	1079 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	NTN5	Q8WTR8	489 aa	Predicted RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	AFG1L	Q8WV93	481 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	GOLGA1	Q92805	767 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	ZNF764	Q96H86	408 aa	Predicted RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	PIGS	Q96S52	555 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	HTATIP2	Q9BUP3	242 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	TRIM2	Q9C040	744 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	PRDM16	Q9HAZ2	1276 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	FLRT1	Q9NZU1	646 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	RCE1	Q9Y256	329 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	PCDHA10	Q9Y5I2	948 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	TNFRSF18	Q9Y5U5	241 aa		4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	COPG1	Q9Y678	874 aa	Known RBP	4.75	□□□□□ -1.65
RAP1B-231	ENST00000544639	CREB3	O43889	395 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	CNTN5	O94779	1100 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	TUBB4A	P04350	444 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	ENO1	P06733	434 aa	Known RBP	4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	RFPL3S	P0C7P2	107 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	CERS1	P27544	350 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	PCP4	P48539	62 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	YPEL5	P62699	121 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	CEP78	Q5JTW2	689 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	RASGRP2	Q7LDG7	609 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	ANKS1B	Q7Z6G8	1248 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	C2CD5	Q86YS7	1000 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	GALNT16	Q8N428	558 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	ADPRHL1	Q8NDY3	354 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	OSR1	Q8TAX0	266 aa	Predicted RBP	4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	PPM1E	Q8WY54	764 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	MAP4K1	Q92918	833 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	FCRL5	Q96RD9	977 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	TM2D2	Q9BX73	214 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	ARHGAP39	Q9C0H5	1083 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	SFXN1	Q9H9B4	322 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	PDE11A	Q9HCR9	933 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	MLXIPL	Q9NP71	852 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	PDGFC	Q9NRA1	345 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	RASSF1	Q9NS23	344 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	SAGE1	Q9NXZ1	904 aa		4.74	□□□□□ -1.65
RAP1B-231	ENST00000544639	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms