RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TAS2R50P59544 299 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 KRTAP10-2P60368 255 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 LMAN2Q12907 356 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 FAM187BQ17R55 369 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 TBRG1Q3YBR2 411 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 WDR45BQ5MNZ6 344 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 KCNV1Q6PIU1 500 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 PARS2Q7L3T8 475 aaKnown RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 MRGPREQ86SM8 312 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 GALNT4Q8N4A0 578 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 PNPLA1Q8N8W4 532 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 USP38Q8NB14 1042 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 DVL3Q92997 716 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RNF125Q96EQ8 232 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RXFP3Q9NSD7 469 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 AASSQ9UDR5 926 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 AMFRQ9UKV5 643 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 SH2B3Q9UQQ2 575 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 SCINQ9Y6U3 715 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ITSN2Q9NZM3 1697 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 FANCAO15360 1455 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PREX2Q70Z35 1606 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ABCA6Q8N139 1617 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PEX12O00623 359 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 SPTLC2O15270 562 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 SEPT4O43236 478 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 TMPRSS11DO60235 418 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 BAIAP3O94812 1187 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 NXPH3O95157 252 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ELFN1P0C7U0 828 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 LYL1P12980 280 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 MMP8P22894 467 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ABCD3P28288 659 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 GGT5P36269 586 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PGM1P36871 562 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 EIF5P55010 431 aaKnown RBP4.13□□□□□ -1.75
SCFD1-207ENST00000544052 GPC5P78333 572 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 CCDC15Q0P6D6 951 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 KIAA0895LQ68EN5 471 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ACAD10Q6JQN1 1059 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 KIRREL2Q6UWL6 708 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 TSPYL6Q8N831 410 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PTGR2Q8N8N7 351 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D22AQ8WUA7 517 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PIGSQ96S52 555 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-207ENST00000544052 TTYH1Q9H313 450 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-207ENST00000544052 STN1Q9H668 368 aaKnown RBP4.13□□□□□ -1.75
SCFD1-207ENST00000544052 PDE11AQ9HCR9 933 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 DLL3Q9NYJ7 618 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ST3GAL5Q9UNP4 418 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 KDM5CP41229 1560 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 ZFYVE16Q7Z3T8 1539 aa4.13□□□□□ -1.75
SCFD1-207ENST00000544052 AKNAQ7Z591 1439 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 MBD3L5A6NJ08 208 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 LINC00473A8K010 186 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 GRM8O00222 908 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CYP3A4P08684 503 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ZNF20P17024 532 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 PTGS2P35354 604 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 GAB1Q13480 694 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 NBPF8Q3BBV2 869 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 SLC45A4Q5BKX6 768 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 RNASE12Q5GAN4 147 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CBWD5Q5RIA9 395 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ABHD17BQ5VST6 288 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 HAUS3Q68CZ6 603 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 LAIR1Q6GTX8 287 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ANO7Q6IWH7 933 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 Q6ZNX1 250 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 RINLQ6ZS11 566 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 RP9Q8TA86 221 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 GLMPQ8WWB7 406 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CDK5RAP1Q96SZ6 601 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CDCP1Q9H5V8 836 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 SERTAD4Q9NUC0 356 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TBX20Q9UMR3 447 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 REXO2Q9Y3B8 237 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 SALL3Q9BXA9 1300 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 ARHGEF12Q9NZN5 1544 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 DIP2CQ9Y2E4 1556 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 KIDINS220Q9ULH0 1771 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 H0YIZ8 118 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TSPAN3O60637 253 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 EBLN1P0CF75 366 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 PNPLA4P41247 253 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 AGTR2P50052 363 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TXNL4AP83876 142 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TUBA3CQ13748 450 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CBFBQ13951 182 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 GPR68Q15743 365 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 NFIL3Q16649 462 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TSTQ16762 297 aaKnown RBP4.12□□□□□ -1.75
SCFD1-207ENST00000544052 SPATS1Q496A3 300 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 FNDC7Q5VTL7 733 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 CFAP161Q6P656 301 aa4.12□□□□□ -1.75
SCFD1-207ENST00000544052 TUBA3EQ6PEY2 450 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms