RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PRMT1Q99873 361 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SNRNP25Q9BV90 132 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DHX35Q9H5Z1 703 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LZTFL1Q9NQ48 299 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ARHGEF3Q9NR81 526 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GPATCH2LQ9NWQ4 482 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MARK1Q9P0L2 795 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 STIM2Q9P246 746 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 COL4A3Q01955 1670 aa14.96□□□□□ -0.01
TNFRSF1A-216ENST00000543995 E9PAM4 449 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 HOXC11O43248 304 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MOCS3O95396 460 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ALADP13716 330 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IL1R2P27930 398 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CTHP32929 405 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RPS24P62847 133 aaKnown RBP14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 BOLA3Q53S33 107 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KCNT1Q5JUK3 1230 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZFYVE27Q5T4F4 411 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IER5LQ5T953 404 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FYB2Q5VWT5 728 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 C14orf80Q86SX3 495 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RALGPS2Q86X27 583 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CCDC117Q8IWD4 279 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SIX5Q8N196 739 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EXOC4Q96A65 974 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MYEOVQ96EZ4 313 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MAGEB5Q9BZ81 275 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IRX2Q9BZI1 471 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 OSBPL2Q9H1P3 480 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GOLPH3Q9H4A6 298 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CREB3O43889 395 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PENKP01210 267 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TNNT1P13805 278 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GLULP15104 373 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 COMTP21964 271 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TAS2R40P59535 323 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SLC25A11Q02978 314 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PRKCQQ04759 706 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TTC39BQ5VTQ0 682 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 C11orf63Q6NUN7 778 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RWDD4Q6NW29 188 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PYROXD2Q8N2H3 581 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EDAQ92838 391 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IGSF8Q969P0 613 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MSANTD3Q96H12 275 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SHDQ96IW2 340 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ALG6Q9Y672 507 aa14.95□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GFRA2O00451 464 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 STK25O00506 426 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZSCAN12O43309 604 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CACNG3O60359 315 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KRT7P08729 469 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 HOXD9P28356 352 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SIGLEC14Q08ET2 396 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PPP6R3Q5H9R7 873 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MPP7Q5T2T1 576 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TXNRD3NBQ6F5E7 133 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CYP4V2Q6ZWL3 525 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 C12orf40Q86WS4 652 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CIR1Q86X95 450 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PSTKQ8IV42 348 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MFN1Q8IWA4 741 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CARNMT1Q8N4J0 409 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RNF10Q8N5U6 811 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KIAA1524Q8TCG1 905 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FAM3CQ92520 227 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CD101Q93033 1021 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EPAS1Q99814 870 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 P2RY13Q9BPV8 354 aa14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.94□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DOCK4Q8N1I0 1966 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 A0A1B0GVM2 712 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KRBA1A5PL33 1030 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FAM72CH0Y354 149 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 H0Y626 953 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TNFRSF10AO00220 468 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MAN2B1O00754 1011 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TULP3O75386 442 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 LRIG2O94898 1065 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RARAP10276 462 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CD72P21854 359 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 L1CAMP32004 1257 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SLC6A11P48066 632 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TPI1P60174 286 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 NRG1Q02297 640 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CDH18Q13634 790 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KRT81Q14533 505 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PON2Q15165 354 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CA9Q16790 459 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GAB4Q2WGN9 574 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ODF2Q5BJF6 829 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FAM72AQ5TYM5 149 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FAM72DQ6L9T8 149 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms