RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MAGEB5Q9BZ81 275 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
SP140-213ENST00000543928 KCNF1Q9H3M0 494 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 VANGL2Q9ULK5 521 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 FZD10Q9ULW2 581 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 USP18Q9UMW8 372 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 DUSP10Q9Y6W6 482 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 TRIOO75962 3097 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 TECTAO75443 2155 aa14.09□□□□□ -0.15
SP140-213ENST00000543928 TYW5A2RUC4 315 aaKnown RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 SHISA7A6NL88 538 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 CACNG3O60359 315 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 TBL1XO60907 577 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 CD72P21854 359 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 HOXD9P28356 352 aaPredicted RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 MAN1A1P33908 653 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 OPRD1P41143 372 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 SLC6A11P48066 632 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 AIF1P55008 147 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 HADHBP55084 474 aaKnown RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 RPS24P62847 133 aaKnown RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 KIF5AQ12840 1032 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 EFHC2Q5JST6 749 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 RABGAP1LQ5R372 815 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 ETFBKMTQ8IXQ9 262 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 CFAP52Q8N1V2 620 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 FAM3CQ92520 227 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 IGSF8Q969P0 613 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 XPO6Q96QU8 1125 aaKnown RBP14.08□□□□□ -0.16
SP140-213ENST00000543928 P2RY13Q9BPV8 354 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 OSBPL2Q9H1P3 480 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 GPATCH2LQ9NWQ4 482 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 STIM2Q9P246 746 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 OR12D3Q9UGF7 316 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 SALL4Q9UJQ4 1053 aa14.08□□□□□ -0.16
SP140-213ENST00000543928 MUC3AQ02505 3323 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 TMEM221A6NGB7 291 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 E9PAM4 449 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 M0R296 226 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 BUB1O43683 1085 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 BUB1BO60566 1050 aaPredicted RBP14.07□□□□□ -0.16
SP140-213ENST00000543928 SRGAP2O75044 1071 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 TULP3O75386 442 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 CCDC175P0C221 793 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 IL1R2P27930 398 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 GALK1P51570 392 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 IRAK1P51617 712 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 NAP1L1P55209 391 aaKnown RBP14.07□□□□□ -0.16
SP140-213ENST00000543928 STARD6P59095 220 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 PON2Q15165 354 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 MPP7Q5T2T1 576 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 ERMARDQ5T6L9 678 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 C1orf228Q6PIY5 440 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 LRRC31Q6UY01 552 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 ZNF852Q6ZMS4 543 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 CYP4V2Q6ZWL3 525 aaPredicted RBP14.07□□□□□ -0.16
SP140-213ENST00000543928 ZNF683Q8IZ20 524 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 PYROXD2Q8N2H3 581 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 CD101Q93033 1021 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 SNRNP25Q9BV90 132 aaKnown RBP14.07□□□□□ -0.16
SP140-213ENST00000543928 EPHX3Q9H6B9 360 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 ZWILCHQ9H900 591 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 TBC1D17Q9HA65 648 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 DNAJC17Q9NVM6 304 aaKnown RBP14.07□□□□□ -0.16
SP140-213ENST00000543928 TRIM10Q9UDY6 481 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 AP4E1Q9UPM8 1137 aa14.07□□□□□ -0.16
SP140-213ENST00000543928 KANSL1LA0AUZ9 987 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 MACROD2A1Z1Q3 448 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 STK25O00506 426 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 TRIM24O15164 1050 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 EIF2DP41214 584 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 TAS2R40P59535 323 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 NRG1Q02297 640 aaPredicted RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 KDSRQ06136 332 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 CA9Q16790 459 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 HADHQ16836 314 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 C5orf22Q49AR2 442 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 BOLA3Q53S33 107 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 KCNT1Q5JUK3 1230 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 ARTNQ5T4W7 220 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 RNF43Q68DV7 783 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 TXNRD3NBQ6F5E7 133 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 GRAMD4Q6IC98 578 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 CIR1Q86X95 450 aaPredicted RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 TPCN2Q8NHX9 752 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms