RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PPM1NQ8N819 430 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 CEP41Q9BYV8 373 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 OR12D3Q9UGF7 316 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 TMEM189-UBE2V1I3L0A0 370 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SNX3O60493 162 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 MLNP12872 115 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SERPINB6P35237 376 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 LIG3P49916 1009 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 PARP6Q2NL67 630 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 LRRC8DQ7L1W4 858 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 LRRC6Q86X45 466 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 ZNF567Q8N184 647 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 PDCD7Q8N8D1 485 aaKnown RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 GSDMBQ8TAX9 411 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SIGLEC10Q96LC7 697 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 ARVCFO00192 962 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 OR4Q2P0C623 313 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 TAC1P20366 129 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 MX2P20592 715 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 PRKCHP24723 683 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 PSMB4P28070 264 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 EPHB2P29323 1055 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 FOXN2P32314 431 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 GRIA1P42261 906 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 BTBD8Q5XKL5 378 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 ICE2Q659A1 982 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 TP53INP2Q8IXH6 220 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 DCP1BQ8IZD4 617 aaKnown RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 MPP5Q8N3R9 675 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 STAMBPL1Q96FJ0 436 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 BRD8Q9H0E9 1235 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 KLHL8Q9P2G9 620 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-209ENST00000543886 SNX10Q9Y5X0 201 aa17.56■□□□□ 0.4
PTPRO-209ENST00000543886 GOLGA8RI6L899 631 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 SUN1O94901 812 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 FAAP100Q0VG06 881 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 CEP350Q5VT06 3117 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 TTC39BQ5VTQ0 682 aaPredicted RBP17.55■□□□□ 0.4
PTPRO-209ENST00000543886 LRRC8BQ6P9F7 803 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 SCN4BQ8IWT1 228 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 NPWQ8N729 165 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 ZCWPW1Q9H0M4 648 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 ZNF180Q9UJW8 692 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 PCDHA11Q9Y5I1 949 aa17.55■□□□□ 0.4
PTPRO-209ENST00000543886 CCT8L1PA6NM43 557 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 KCNK1O00180 336 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 TM9SF1O15321 606 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 MTSS1O43312 755 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 KRT37O76014 449 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 LRIG2O94898 1065 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 OAZ2O95190 189 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 OAS1P00973 400 aaKnown RBP17.54■□□□□ 0.4
PTPRO-209ENST00000543886 SELPP16109 830 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 CYP2C18P33260 490 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PPIDQ08752 370 aaKnown RBP17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PDK4Q16654 411 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 LGSNQ5TDP6 509 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 CASC4Q6P4E1 433 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PID1Q7Z2X4 250 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 SPATA21Q7Z572 469 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 ABI1Q8IZP0 508 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 BANPQ8N9N5 519 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 KLF6Q99612 283 aaPredicted RBP17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PLAC1Q9HBJ0 212 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 IGSF9Q9P2J2 1179 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 SDR42E2A6NKP2 422 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 TADA2AO75478 443 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 IGLV3-25P01717 112 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 C1QAP02745 245 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 LRRC8CQ8TDW0 803 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 GRAMD1AQ96CP6 724 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 HDAC11Q96DB2 347 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PITPNM3Q9BZ71 974 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 OSBPL2Q9H1P3 480 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 KDM4CQ9H3R0 1056 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 ACTR5Q9H9F9 607 aaPredicted RBP17.54■□□□□ 0.4
PTPRO-209ENST00000543886 DNAJB4Q9UDY4 337 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 PHF24Q9UPV7 400 aa17.54■□□□□ 0.4
PTPRO-209ENST00000543886 MYO16Q9Y6X6 1858 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 CXorf49A8MYA2 514 aaPredicted RBP17.53■□□□□ 0.4
PTPRO-209ENST00000543886 TNFRSF10BO14763 440 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 IRAK2O43187 625 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 LPXNO60711 386 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 COL6A1P12109 1028 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 PTPN3P26045 913 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 GALNT2Q10471 571 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 MTFR1Q15390 333 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 NFE2Q16621 373 aaPredicted RBP17.53■□□□□ 0.4
PTPRO-209ENST00000543886 BRMS1LQ5PSV4 323 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms