RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 C2CD4DB7Z1M9 353 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 FGF10O15520 208 aaPredicted RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 ECI2O75521 394 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 NFATC1O95644 943 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 EPHB2P29323 1055 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 ZXDBP98169 803 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 AUHQ13825 339 aaKnown RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 CA9Q16790 459 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 KAZNQ674X7 775 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 TANGO2Q6ICL3 276 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 CYP4V2Q6ZWL3 525 aaPredicted RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 VSIG1Q86XK7 387 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 MFSD6LQ8IWD5 586 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 PYROXD2Q8N2H3 581 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 CPXM2Q8N436 756 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 HJURPQ8NCD3 748 aaPredicted RBP12.28□□□□□ -0.44
DDB1-223ENST00000543658 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 ATP2A3Q93084 1043 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 CARD9Q9H257 536 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 SNX12Q9UMY4 172 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 SNX10Q9Y5X0 201 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 SAR1BQ9Y6B6 198 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
DDB1-223ENST00000543658 REV3LO60673 3130 aa12.27□□□□□ -0.44
DDB1-223ENST00000543658 GOLGA6L7A0A1B0GV03 622 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 CEP104O60308 925 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 TSPAN3O60637 253 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 LRIG2O94898 1065 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 ADH1CP00326 375 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 KLKB1P03952 638 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 IL9P15248 144 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 ZFXP17010 805 aaPredicted RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 GOT1P17174 413 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PSMC3P17980 439 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 FCARP24071 287 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PEX5P50542 639 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 MLLT6P55198 1093 aaPredicted RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 TFF2Q03403 129 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 NR1H3Q13133 447 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 ZNF211Q13398 564 aaPredicted RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 TFDP2Q14188 446 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 DPYSL3Q14195 570 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 GRM2Q14416 872 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PDGFRLQ15198 375 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PPP2R5EQ16537 467 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 MPPE1Q53F39 396 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 FAM133BQ5BKY9 247 aaKnown RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 NADSYN1Q6IA69 706 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 RFWD3Q6PCD5 774 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 VITQ6UXI7 678 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 TPGS1Q6ZTW0 290 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 RFX8Q6ZV50 586 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 RAPGEF5Q92565 580 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 ALG3Q92685 438 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 WBP2Q969T9 261 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 NXPE3Q969Y0 559 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 OSBPL9Q96SU4 736 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 NAP1L3Q99457 506 aaPredicted RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 ZYG11BQ9C0D3 744 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 ANLNQ9NQW6 1124 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 PPARGC1AQ9UBK2 798 aaKnown RBP12.27□□□□□ -0.45
DDB1-223ENST00000543658 STOML2Q9UJZ1 356 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 NUP205Q92621 2012 aa12.27□□□□□ -0.45
DDB1-223ENST00000543658 KIAA1549LQ6ZVL6 1849 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 ZNF487B1APH4 448 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 CES2O00748 559 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 APOL1O14791 398 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 TBL1XO60907 577 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 URI1O94763 535 aaPredicted RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 TJP3O95049 919 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 CD48P09326 243 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 GDI1P31150 447 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 SLC6A4P31645 630 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 CXCR5P32302 372 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 SERPINB6P35237 376 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 PAFAH1B1P43034 410 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 ANO4Q32M45 955 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 ANKRD20A8PQ5CZ79 823 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 PAPD7Q5XG87 772 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 FBXL22Q6P050 247 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 TMCO3Q6UWJ1 677 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 FAM217AQ8IXS0 508 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 ZDHHC14Q8IZN3 488 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 ZNF557Q8N988 423 aaPredicted RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 ST13P5Q8NFI4 369 aaPredicted RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 CSGALNACT1Q8TDX6 532 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 FGF14Q92915 247 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms