RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FAM156AQ8NDB6 213 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 C1orf162Q8NEQ5 155 aaPredicted RBP5.4□□□□□ -1.55
CLIP1-217ENST00000543205 SEMA4DQ92854 862 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 ANP32EQ9BTT0 268 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 PI4K2AQ9BTU6 479 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 XYLT2Q9H1B5 865 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 EPN3Q9H201 632 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 SNX25Q9H3E2 840 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 RXFP1Q9HBX9 757 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 KRT82Q9NSB4 513 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 TAB2Q9NYJ8 693 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 MTRRQ9UBK8 725 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 FBXL5Q9UKA1 691 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 BACE2Q9Y5Z0 518 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 CDY1Q9Y6F8 540 aa5.4□□□□□ -1.55
CLIP1-217ENST00000543205 MUC3AQ02505 3323 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 ANK1P16157 1881 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 PDCD11Q14690 1871 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 OR6C75A6NL08 312 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 TIPRLO75663 272 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 ATE1O95260 518 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 IL33O95760 270 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 ASS1P00966 412 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 OR1D2P34982 312 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 GNL1P36915 607 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 NOP14P78316 857 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 TSPY1Q01534 308 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 HYAL1Q12794 435 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 LRMPQ12912 555 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 IQCB1Q15051 598 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SLC45A4Q5BKX6 768 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 DNAJC21Q5F1R6 531 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 INTS11Q5TA45 600 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SPOPLQ6IQ16 392 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 FDX2Q6P4F2 183 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SCARA5Q6ZMJ2 495 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 GBP6Q6ZN66 633 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 LUZP1Q86V48 1076 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 PALB2Q86YC2 1186 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SCUBE1Q8IWY4 988 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 OR6B3Q8NGW1 331 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SPATA18Q8TC71 538 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 GPBAR1Q8TDU6 330 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 GAL3ST3Q96A11 431 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 ELMO3Q96BJ8 720 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 FAXDC2Q96IV6 333 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 NT5C1BQ96P26 610 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 CLSTN3Q9BQT9 956 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 DNAI2Q9GZS0 605 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 MYLK2Q9H1R3 596 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 NDST4Q9H3R1 872 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 SMYD3Q9H7B4 428 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 CYP4F12Q9HCS2 524 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 DDX43Q9NXZ2 648 aaKnown RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 DPP7Q9UHL4 492 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 L1RE1Q9UN81 338 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 CRYL1Q9Y2S2 319 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 COQ4Q9Y3A0 265 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 COL4A4P53420 1690 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-217ENST00000543205 PRUNE2Q8WUY3 3088 aa5.39□□□□□ -1.55
CLIP1-217ENST00000543205 GTPBP10A4D1E9 387 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 TBX1O43435 398 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 TACC1O75410 805 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 GLUD1P00367 558 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 HSD3B1P14060 373 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 GLB1P16278 677 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ZNF18P17022 549 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 TRIM21P19474 475 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 WARSP23381 471 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 PCSK1P29120 753 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ELF1P32519 619 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 GALNSP34059 522 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CHRNA4P43681 627 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CLCN4P51793 760 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ZNF445P59923 1031 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 YWHAEP62258 255 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 PRKG2Q13237 762 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 KRT31Q15323 416 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 EXOC3L4Q17RC7 722 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 MIIPQ5JXC2 388 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 SLC8B1Q6J4K2 584 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 RETSATQ6NUM9 610 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 TLDC1Q6P9B6 456 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 RSPO2Q6UXX9 243 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CMIPQ8IY22 773 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 DCP1BQ8IZD4 617 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 EFHBQ8N7U6 833 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ZBTB34Q8NCN2 500 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ACRBPQ8NEB7 543 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CASP10Q92851 521 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 WDR89Q96FK6 387 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 ACBD6Q9BR61 282 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 MRPL45Q9BRJ2 306 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CRACR2AQ9BSW2 395 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 AARSD1Q9BTE6 412 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 TMPRSS13Q9BYE2 586 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 INTS2Q9H0H0 1204 aaKnown RBP5.38□□□□□ -1.55
CLIP1-217ENST00000543205 VPS16Q9H269 839 aa5.38□□□□□ -1.55
CLIP1-217ENST00000543205 CYP3A43Q9HB55 503 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms