RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SLC10A4Q96EP9 437 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 MARK4Q96L34 752 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 SPATA16Q9BXB7 569 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 BRCA2P51587 3418 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 ADCY6O43306 1168 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 TRPA1O75762 1119 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 CPOXP36551 454 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 IFRD2Q12894 506 aaPredicted RBP15.76■□□□□ 0.11
CNOT9-208ENST00000542068 PDE1CQ14123 709 aaPredicted RBP15.76■□□□□ 0.11
CNOT9-208ENST00000542068 FAM47CQ5HY64 1035 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 FRMD7Q6ZUT3 714 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 SDCCAG8Q86SQ7 713 aaPredicted RBP15.76■□□□□ 0.11
CNOT9-208ENST00000542068 GALNT4Q8N4A0 578 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 USP13Q92995 863 aaPredicted RBP15.76■□□□□ 0.11
CNOT9-208ENST00000542068 SIGLEC10Q96LC7 697 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 FZD8Q9H461 694 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 XPNPEP3Q9NQH7 507 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 TMEM216Q9P0N5 145 aa15.76■□□□□ 0.11
CNOT9-208ENST00000542068 C2CD4BA6NLJ0 364 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 KLF11O14901 512 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 DYNC1LI2O43237 492 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 B4GALT4O60513 344 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 ARRB2P32121 409 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 GRIA2P42262 883 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 NUMBP49757 651 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 RBP5P82980 135 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 NME3Q13232 169 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 CYP4V2Q6ZWL3 525 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 RNF169Q8NCN4 708 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 NDNQ99608 321 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 FRMD8P1Q9BZ68 369 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 KLHL4Q9C0H6 718 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 TMPRSS4Q9NRS4 437 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 APPL1Q9UKG1 709 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 TNFSF13BQ9Y275 285 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 MCM3APO60318 1980 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 COL11A1P12107 1806 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 BUD23O43709 281 aaKnown RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 CILPO75339 1184 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 PYGLP06737 847 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 VCLP18206 1134 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 ACAT1P24752 427 aaKnown RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 IDH3AP50213 366 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 PKNOX1P55347 436 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 IYDQ6PHW0 289 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 MAVSQ7Z434 540 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 FNIP1Q8TF40 1166 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 NR1H4Q96RI1 486 aaPredicted RBP15.75■□□□□ 0.11
CNOT9-208ENST00000542068 DPEP3Q9H4B8 488 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 PDZD7Q9H5P4 517 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 CAB39LQ9H9S4 337 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 CDH22Q9UJ99 828 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 PCDHGB4Q9UN71 923 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 PCDHGB5Q9Y5G0 923 aa15.75■□□□□ 0.11
CNOT9-208ENST00000542068 ALDOAP04075 364 aaKnown RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 PRKCHP24723 683 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 CRHR1P34998 444 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 CCR10P46092 362 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 CDK7P50613 346 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 MSLNQ13421 630 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 DLG2Q15700 870 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 TAZQ16635 292 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 HEATR6Q6AI08 1181 aaKnown RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 NXNQ6DKJ4 435 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 PAOXQ6QHF9 649 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 MARK2Q7KZI7 788 aaKnown RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 MCRS1Q96EZ8 462 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 LHX5Q9H2C1 402 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 WDR55Q9H6Y2 383 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 DDX18Q9NVP1 670 aaKnown RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 EMCNQ9ULC0 261 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 IL18RAPO95256 599 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 FGF3P11487 239 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 WASHC5Q12768 1159 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 EGFL6Q8IUX8 553 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 SPNS2Q8IVW8 549 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 APOL2Q9BQE5 337 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 BARX2Q9UMQ3 279 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 POMPQ9Y244 141 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 INPP5FQ9Y2H2 1132 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 SNNO75324 88 aaPredicted RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 HSPA4LO95757 839 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 SLC25A27O95847 323 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 AMHP03971 560 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 VDRP11473 427 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 CRABP2P29373 138 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 PPM1LQ5SGD2 360 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 MBLAC2Q68D91 279 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 ZNF534Q76KX8 674 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 CNBD2Q96M20 576 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 PIN4Q9Y237 131 aaKnown RBP15.74■□□□□ 0.11
CNOT9-208ENST00000542068 PPME1Q9Y570 386 aa15.74■□□□□ 0.11
CNOT9-208ENST00000542068 C22orf31O95567 290 aa15.73■□□□□ 0.11
CNOT9-208ENST00000542068 NUDT2P50583 147 aa15.73■□□□□ 0.11
CNOT9-208ENST00000542068 GK3PQ14409 553 aa15.73■□□□□ 0.11
CNOT9-208ENST00000542068 PDK3Q15120 406 aa15.73■□□□□ 0.11
CNOT9-208ENST00000542068 GSTA3Q16772 222 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms