RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 WWP1Q9H0M0 922 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 NXF3Q9H4D5 531 aaKnown RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 APPL1Q9UKG1 709 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 ZNF510Q9Y2H8 683 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TRIM17Q9Y577 477 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 IKBKGQ9Y6K9 419 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 SZT2Q5T011 3432 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CNTNAP2Q9UHC6 1331 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 HMX2A2RU54 273 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 FAM189A1O60320 539 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 FKBP6O75344 327 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TOM1L1O75674 476 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 F2P00734 622 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 PIM1P11309 404 aaPredicted RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 CDK4P11802 303 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 AKR1A1P14550 325 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 ARRB2P32121 409 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 MSX2P35548 267 aaPredicted RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 MXD4Q14582 209 aaPredicted RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 RAB6CQ53S08 254 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 RABGAP1LQ5R372 815 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TRMT10BQ6PF06 316 aaKnown RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 CATSPER4Q7RTX7 472 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 NUDCD3Q8IVD9 361 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 EMC1Q8N766 993 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 ZFP28Q8NHY6 868 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 JOSD2Q8TAC2 188 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CCDC28BQ9BUN5 200 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 RAB6CQ9H0N0 254 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 C17orf75Q9HAS0 396 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 SIRPGQ9P1W8 387 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TEX264Q9Y6I9 313 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 PDE4DIPQ5VU43 2346 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.9
THBS3-211ENST00000541990 LACTBL1A8MY62 500 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PIK3R2O00459 728 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 KLF11O14901 512 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ATP9BO43861 1147 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 TSPAN1O60635 241 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 COQ9O75208 318 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 IL1BP01584 269 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 C4BPAP04003 597 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 STAG3L1P0CL83 205 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PMLP29590 882 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 HOXA11P31270 313 aaPredicted RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 EMP3P54852 163 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 RPL10AP62906 217 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 MROH9Q5TGP6 573 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ZNF677Q86XU0 584 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 LPPQ93052 612 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 C18orf25Q96B23 403 aaPredicted RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 RBM38Q9H0Z9 239 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 FZD8Q9H461 694 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PDZD7Q9H5P4 517 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 DNAJB4Q9UDY4 337 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 CDH22Q9UJ99 828 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PIN4Q9Y237 131 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 POMPQ9Y244 141 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 E2F8A0AVK6 867 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ACKR2O00590 384 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 SNNO75324 88 aaPredicted RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 SERPINA6P08185 405 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ATXN3P54252 364 aaPredicted RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 ATN1P54259 1190 aaPredicted RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 SLC25A11Q02978 314 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 DPYSL3Q14195 570 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 MAP7Q14244 749 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ZACNQ401N2 412 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ZNF484Q5JVG2 852 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 MFSD14CQ5VZR4 134 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 JADE1Q6IE81 842 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 IYDQ6PHW0 289 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 RBM12BQ8IXT5 1001 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 UNC5BQ8IZJ1 945 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 ZNF606Q8WXB4 792 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 LIN28AQ9H9Z2 209 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
THBS3-211ENST00000541990 DNAJC16Q9Y2G8 782 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 PTCH2Q9Y6C5 1203 aa9.4□□□□□ -0.9
THBS3-211ENST00000541990 GPR32O75388 356 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 LRCH4O75427 683 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 TMCC1O94876 653 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 ITGAXP20702 1163 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 RFC1P35251 1148 aaPredicted RBP9.39□□□□□ -0.91
THBS3-211ENST00000541990 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
THBS3-211ENST00000541990 YWHAZP63104 245 aaKnown RBP9.39□□□□□ -0.91
THBS3-211ENST00000541990 MYBPC1Q00872 1141 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 FRMD7Q6ZUT3 714 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 ENOSF1Q7L5Y1 443 aa9.39□□□□□ -0.91
THBS3-211ENST00000541990 ADGRG6Q86SQ4 1221 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms