RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 PCCBP05166 539 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 PLEKP08567 350 aaPredicted RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ANXA5P08758 320 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 OCM2P0CE71 109 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 OCMP0CE72 109 aaPredicted RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 NCKAP1LP55160 1127 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 E4F1Q66K89 784 aaPredicted RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 SLC47A2Q86VL8 602 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 COLGALT2Q8IYK4 626 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ARHGAP24Q8N264 748 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 KBTBD4Q9NVX7 518 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 KLHL14Q9P2G3 628 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 XPO7Q9UIA9 1087 aaKnown RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 PEAK1Q9H792 1746 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ITGAVP06756 1048 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 SYPP08247 313 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 HNRNPA1P09651 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 FGRP09769 529 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 NRLP54845 237 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 CSTF1Q05048 431 aaKnown RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 SGO1Q5FBB7 561 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 MAGEC3Q8TD91 643 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 MED8Q96G25 268 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 NUF2Q9BZD4 464 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 PSD3Q9NYI0 1048 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 SPASTQ9UBP0 616 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 HBS1LQ9Y450 684 aaKnown RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ITGB6P18564 788 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 CXCR2P25025 360 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ARL2P36404 184 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 PEX5P50542 639 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 GTF2A1P52655 376 aaPredicted RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 ILF3Q12906 894 aaKnown RBP eCLIP8.87□□□□□ -0.992e-13■■■■■ 45.1
FNDC3A-206ENST00000541916 DDX39BQ13838 428 aaKnown RBP8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 MMGT1Q8N4V1 131 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 VMP1Q96GC9 406 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 OR12D3Q9UGF7 316 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 SUSD2Q9UGT4 822 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 LRRC37A3O60309 1634 aa8.87□□□□□ -0.99
FNDC3A-206ENST00000541916 PLIN4Q96Q06 1357 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 MDM4O15151 490 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 EARS2Q5JPH6 523 aaKnown RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CBWD3Q5JTY5 395 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CBWD5Q5RIA9 395 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ZBTB41Q5SVQ8 909 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 SARM1Q6SZW1 724 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 LRRC69Q6ZNQ3 347 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CFAP52Q8N1V2 620 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 FAM71DQ8N9W8 422 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 SNF8Q96H20 258 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 TOX2Q96NM4 488 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 LPIN3Q9BQK8 851 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 TXLNGQ9NUQ3 528 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 COG5Q9UP83 839 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 GLP2RO95838 553 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CYP2A7P20853 494 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 FOXM1Q08050 763 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 SLC18A3Q16572 532 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 NFIL3Q16649 462 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 NT5DC1Q5TFE4 455 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CCDC137Q6PK04 289 aaKnown RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 SERINC5Q86VE9 423 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 P2RY13Q9BPV8 354 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 OSBPL8Q9BZF1 889 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 BRD8Q9H0E9 1235 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 LHX5Q9H2C1 402 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 C8orf33Q9H7E9 229 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 EML4Q9HC35 981 aaKnown RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CLIC5Q9NZA1 410 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 SQORQ9Y6N5 450 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 VIPP01282 170 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ITGAXP20702 1163 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ZNF135P52742 658 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 RPL6Q02878 288 aaKnown RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 MCL1Q07820 350 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CLEC16AQ2KHT3 1053 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CACNA2D3Q8IZS8 1091 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ZNF333Q96JL9 665 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 BTBD1Q9H0C5 482 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 OSBPL2Q9H1P3 480 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 A0A088AWK7 358 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 WDR91A4D1P6 747 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 XPO1O14980 1071 aaKnown RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 MYBL2P10244 700 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 PCNAP12004 261 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ZNF10P21506 573 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 FAM43BQ6ZT52 329 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 FMO2Q99518 471 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 PACSIN2Q9UNF0 486 aaPredicted RBP8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 INVSQ9Y283 1065 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 NEMP2A6NFY4 417 aa8.86□□□□□ -0.99
FNDC3A-206ENST00000541916 CLDN11O75508 207 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms