RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ATL2Q8NHH9 583 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 SLC46A2Q9BY10 475 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 NACA2Q9H009 215 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 SMOC2Q9H3U7 446 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 RASAL2Q9UJF2 1139 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 DNPEPQ9ULA0 475 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 ECEL1O95672 775 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 GBP1P32455 592 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 EIF4EBP2Q13542 120 aaPredicted RBP28.73■■■□□ 2.19
CCM2-218ENST00000541586 EFHC2Q5JST6 749 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 DRICH1Q6PGQ1 229 aaPredicted RBP28.73■■■□□ 2.19
CCM2-218ENST00000541586 POTEHQ6S545 545 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 GSPT2Q8IYD1 628 aaKnown RBP28.73■■■□□ 2.19
CCM2-218ENST00000541586 ARL14EPQ8N8R7 260 aaPredicted RBP28.73■■■□□ 2.19
CCM2-218ENST00000541586 TTC13Q8NBP0 860 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 ST13P5Q8NFI4 369 aaPredicted RBP28.73■■■□□ 2.19
CCM2-218ENST00000541586 PCDH19Q8TAB3 1148 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 RNF139Q8WU17 664 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 ERP44Q9BS26 406 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 RAB17Q9H0T7 212 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 TASP1Q9H6P5 420 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 WDCPQ9H6R7 721 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 ANLNQ9NQW6 1124 aa28.73■■■□□ 2.19
CCM2-218ENST00000541586 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.73■■■□□ 2.19
CCM2-218ENST00000541586 I6L893 689 aaPredicted RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 HDCP19113 662 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 CARSP49589 748 aaKnown RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 OTUD4Q01804 1114 aaKnown RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 SCAPQ12770 1279 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 SNX30Q5VWJ9 437 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 NPAS3Q8IXF0 933 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 PQLC3Q8N755 202 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 TTC16Q8NEE8 873 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 ACTL9Q8TC94 416 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 GRK7Q8WTQ7 553 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 IFT81Q8WYA0 676 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 SEC14L1Q92503 715 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 SLC22A12Q96S37 553 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 MYADMQ96S97 322 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 RNF38Q9H0F5 515 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 SFMBT1Q9UHJ3 866 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 FEZ2Q9UHY8 353 aaPredicted RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 APOC4-APOC2K7ER74 178 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 IRAK2O43187 625 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 APOC2P02655 101 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 IL9P15248 144 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 KCNQ1P51787 676 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 BYSLQ13895 437 aaKnown RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 SMAD2Q15796 467 aaKnown RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 C10orf120Q5SQS8 335 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 TMCO3Q6UWJ1 677 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 CCDC114Q96M63 670 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 ARFGAP3Q9NP61 516 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 CLIC5Q9NZA1 410 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 CWC15Q9P013 229 aaKnown RBP28.72■■■□□ 2.19
CCM2-218ENST00000541586 CDH7Q9ULB5 785 aa28.72■■■□□ 2.19
CCM2-218ENST00000541586 SEC31AO94979 1220 aaKnown RBP28.71■■■□□ 2.19
CCM2-218ENST00000541586 ARL13BQ3SXY8 428 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 DUPD1Q68J44 220 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 SLC9A4Q6AI14 798 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 DDX42Q86XP3 938 aaKnown RBP eCLIP28.71■■■□□ 2.19
CCM2-218ENST00000541586 SLC35B2Q8TB61 432 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 CSPG4P5Q96PW8 444 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 FRMD8P1Q9BZ68 369 aaPredicted RBP28.71■■■□□ 2.19
CCM2-218ENST00000541586 TRIM31Q9BZY9 425 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 SMG9Q9H0W8 520 aaKnown RBP28.71■■■□□ 2.19
CCM2-218ENST00000541586 FAM50BQ9Y247 325 aa28.71■■■□□ 2.19
CCM2-218ENST00000541586 COCHO43405 550 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 CKMP06732 381 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 PECAM1P16284 738 aaPredicted RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 GOT1P17174 413 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 ATP5C1P36542 298 aaKnown RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 AVPR1AP37288 418 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 PUS10Q3MIT2 529 aaKnown RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 BEND6Q5SZJ8 279 aaPredicted RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 MSANTD2Q6P1R3 559 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 NKD2Q969F2 451 aaPredicted RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 RNF34Q969K3 372 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 TKTL2Q9H0I9 626 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 DPH5Q9H2P9 285 aa28.7■■■□□ 2.19
CCM2-218ENST00000541586 RCOR3Q9P2K3 495 aaPredicted RBP28.7■■■□□ 2.19
CCM2-218ENST00000541586 TRAV19A0A0A6YYK7 116 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 APOL1O14791 398 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 DAPK3O43293 454 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 MSI1O43347 362 aaKnown RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 OAS1P00973 400 aaKnown RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 DDX6P26196 483 aaKnown RBP eCLIP28.69■■■□□ 2.18
CCM2-218ENST00000541586 ARL4AP40617 200 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 VCPP55072 806 aaKnown RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 EFEMP1Q12805 493 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 OASLQ15646 514 aaKnown RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 AAK1Q2M2I8 961 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 NPNTQ6UXI9 565 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 CMTM8Q8IZV2 173 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 PLD5Q8N7P1 536 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 ZSCAN18Q8TBC5 510 aaPredicted RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 PHF7Q9BWX1 381 aaPredicted RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 MBL2P11226 248 aaPredicted RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 CUL1Q13616 776 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms