RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MYEOVQ96EZ4 313 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 FAM83CQ9BQN1 747 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 MAGEB5Q9BZ81 275 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 CHRDQ9H2X0 955 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 LMAN1LQ9HAT1 526 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 MRPL47Q9HD33 250 aaKnown RBP17.33■□□□□ 0.36
UBC-208ENST00000540700 HPS4Q9NQG7 708 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 SEMA4GQ9NTN9 838 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 CTTNBP2NLQ9P2B4 639 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 ANAPC7Q9UJX3 599 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 BAHCC1Q9P281 2608 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 COL4A2P08572 1712 aa17.33■□□□□ 0.36
UBC-208ENST00000540700 GOLGA6L7A0A1B0GV03 622 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 OTOL1A6NHN0 477 aaPredicted RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 KCNU1A8MYU2 1149 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 MAN2B1O00754 1011 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 PJA2O43164 708 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 GDF9O60383 454 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 MTA2O94776 668 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 PTMAP06454 111 aaKnown RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 PSMC3P17980 439 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 PSMA2P25787 234 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 RING1Q06587 406 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 TNK2Q07912 1038 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 EML3Q32P44 896 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
UBC-208ENST00000540700 DENND1CQ8IV53 801 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 OSCP1Q8WVF1 389 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 RFFLQ8WZ73 363 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 DNASE1L2Q92874 299 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 CNPY3Q9BT09 278 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 RRN3Q9NYV6 651 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 UVRAGQ9P2Y5 699 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
UBC-208ENST00000540700 E2F8A0AVK6 867 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 GFRA2O00451 464 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 MOCS2O96007 188 aaPredicted RBP17.31■□□□□ 0.36
UBC-208ENST00000540700 GDI1P31150 447 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 GGCXP38435 758 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 ARHGAP25P42331 645 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 CCR3P51677 355 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 SATB1Q01826 763 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 FAM133BQ5BKY9 247 aaKnown RBP17.31■□□□□ 0.36
UBC-208ENST00000540700 PRR23CQ6ZRP0 262 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 STRADAQ7RTN6 431 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 DDX42Q86XP3 938 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBC-208ENST00000540700 ZNF687Q8N1G0 1237 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 CCDC185Q8N715 623 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 DEPDC1BQ8WUY9 529 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 FAM3CQ92520 227 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 E2F7Q96AV8 911 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 CHFRQ96EP1 664 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 TRMT61BQ9BVS5 477 aaKnown RBP17.31■□□□□ 0.36
UBC-208ENST00000540700 ARHGEF38Q9NXL2 777 aa17.31■□□□□ 0.36
UBC-208ENST00000540700 FRYQ5TBA9 3013 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 CHURC1-FNTBB4DL54 471 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
UBC-208ENST00000540700 LRCH4O75427 683 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 SLC6A4P31645 630 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 FNTBP49356 437 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 SGSHP51688 502 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 DMWDQ09019 674 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 TXNRD3NBQ6F5E7 133 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 FAM217AQ8IXS0 508 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 PRMT1Q99873 361 aaKnown RBP17.3■□□□□ 0.36
UBC-208ENST00000540700 TKTL2Q9H0I9 626 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 GOLPH3Q9H4A6 298 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 EBF3Q9H4W6 596 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
UBC-208ENST00000540700 STOML2Q9UJZ1 356 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 PYCARDQ9ULZ3 195 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 PIAS3Q9Y6X2 628 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 FAM208BQ5VWN6 2430 aa17.3■□□□□ 0.36
UBC-208ENST00000540700 A0A0A6YYK5 440 aaPredicted RBP17.29■□□□□ 0.36
UBC-208ENST00000540700 CHADO15335 359 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 HRO43593 1189 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 BUB1O43683 1085 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 ACSL4O60488 711 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 LRP3O75074 770 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 IL1R2P27930 398 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 CCR1P32246 355 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 GBP1P32455 592 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 CXCL12P48061 93 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 KPNA1P52294 538 aaPredicted RBP17.29■□□□□ 0.36
UBC-208ENST00000540700 KRT83P78385 493 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 GAB4Q2WGN9 574 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 NUGGCQ68CJ6 796 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 HEATR6Q6AI08 1181 aaKnown RBP17.29■□□□□ 0.36
UBC-208ENST00000540700 C14orf80Q86SX3 495 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 KIAA1328Q86T90 577 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 TTC8Q8TAM2 541 aa17.29■□□□□ 0.36
UBC-208ENST00000540700 PRICKLE1Q96MT3 831 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms