RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRUB2O95900 331 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 DNTTP04053 509 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CFIP05156 583 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 SRPRAP08240 638 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 ADRB1P08588 477 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CCDC172P0C7W6 258 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CEACAM1P13688 526 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CSRP1P21291 193 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 BCKDHBP21953 392 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 WASP42768 502 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CCDC15Q0P6D6 951 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 MESP2Q0VG99 397 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CAMK2GQ13555 558 aaPredicted RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 KCNJ12Q14500 433 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 FUT11Q495W5 492 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 DCAF6Q58WW2 860 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CHST9Q7L1S5 443 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 DSG4Q86SJ6 1040 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 SFTPA1Q8IWL2 248 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 RLN3Q8WXF3 142 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 KAT5Q92993 513 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF419Q96HQ0 510 aaPredicted RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 NAT10Q9H0A0 1025 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 ABCB8Q9NUT2 735 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 USP36Q9P275 1121 aaKnown RBP10.77□□□□□ -0.69
CDCA3-208ENST00000540683 DNAJC12Q9UKB3 198 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 CYP8B1Q9UNU6 501 aa10.77□□□□□ -0.69
CDCA3-208ENST00000540683 KCNU1A8MYU2 1149 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 UPK3BL1B0FP48 263 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 UPK3BL2E5RIL1 263 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 TRIM24O15164 1050 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 GDF9O60383 454 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 OPHN1O60890 802 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 LUC7L3O95232 432 aaKnown RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 IGLV3-19P01714 112 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 SLC9A1P19634 815 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 HLA-FP30511 346 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 HOXC13P31276 330 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 NOS2P35228 1153 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 IL12RB1P42701 662 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 RAPGEF1Q13905 1077 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 SYCP1Q15431 976 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 TEAD4Q15561 434 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 CCDC6Q16204 474 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 MBLAC2Q68D91 279 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 DENND1BQ6P3S1 775 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 KIAA0907Q7Z7F0 614 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 CHSY1Q86X52 802 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 FAM71AQ8IYT1 594 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 ENOX1Q8TC92 643 aaKnown RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 NDRG1Q92597 394 aaKnown RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 TTC17Q96AE7 1141 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 SLC39A13Q96H72 371 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 HSPA12BQ96MM6 686 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 ACOX2Q99424 681 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 DDIT4Q9NX09 232 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 MBD1Q9UIS9 605 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-208ENST00000540683 ABCA7Q8IZY2 2146 aa10.76□□□□□ -0.69
CDCA3-208ENST00000540683 A0A1B0GTW7 788 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 A0A1B0GVM2 712 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 MED19A0JLT2 244 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TARSL2A2RTX5 802 aaKnown RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TCAF2A6NFQ2 919 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 C4orf47A7E2U8 309 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 PIK3R2O00459 728 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 PAPSS1O43252 624 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 MOCS2O96007 188 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 C7P10643 843 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TPMTP51580 245 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 IRX4P78413 519 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 SLC6A3Q01959 620 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 PLEKHG6Q3KR16 790 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 DPCR1Q3MIW9 517 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 OR6B2Q6IFH4 312 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 PPP1R2P3Q6NXS1 205 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 LRRC31Q6UY01 552 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 USP30Q70CQ3 517 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 SLC26A9Q7LBE3 791 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TAC4Q86UU9 113 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 IRF2BP1Q8IU81 584 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CARNMT1Q8N4J0 409 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF397Q8NF99 534 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CLEC4CQ8WTT0 213 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TOE1Q96GM8 510 aaKnown RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CCDC114Q96M63 670 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 SLC2A13Q96QE2 648 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 ZSWIM1Q9BR11 485 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 STK33Q9BYT3 514 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms