RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KCTD15Q96SI1 283 aaPredicted RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 VCX3BQ9H321 246 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 PDGFCQ9NRA1 345 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 SLC17A6Q9P2U8 582 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 AP4E1Q9UPM8 1137 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 EVPLQ92817 2033 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 MCM3APO60318 1980 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 A0A087WZ62 844 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 HARS2P49590 506 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 ATXN1P54253 815 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 IGBP1P78318 339 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CRADDP78560 199 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 XIAPP98170 497 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ACAD11Q709F0 780 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 NT5DC4Q86YG4 428 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 SLC26A7Q8TE54 656 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ARNTL2Q8WYA1 636 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 OLFM3Q96PB7 478 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 FDXACB1Q9BRP7 624 aaPredicted RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 NAT9Q9BTE0 207 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ELP3Q9H9T3 547 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CSADQ9Y600 493 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 RALBP11234 206 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 VAV1P15498 845 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 CDK7P50613 346 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 DEUP1Q05D60 604 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 RSPH3Q86UC2 560 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 AZIN2Q96A70 460 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 TMEM216Q9P0N5 145 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 ADAMTS6Q9UKP5 1117 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 NR2E3Q9Y5X4 410 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 A0A0G2JLL6 359 aaPredicted RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 ADM5C9JUS6 153 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 PIM1P11309 404 aaPredicted RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 MGAT1P26572 445 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 ARRB2P32121 409 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 EPHB1P54762 984 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 SESN2P58004 480 aaPredicted RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 PPM1JQ5JR12 505 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 PRRT2Q7Z6L0 340 aaPredicted RBP12.63□□□□□ -0.39
NPC1-202ENST00000540608 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
NPC1-202ENST00000540608 ANKRD33BA6NCL7 494 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
NPC1-202ENST00000540608 UQCRBP14927 111 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 PRDX6P30041 224 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 ZNF484Q5JVG2 852 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 SLC26A9Q7LBE3 791 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 GPC2Q8N158 579 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 CCDC185Q8N715 623 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 POMPQ9Y244 141 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 USP3Q9Y6I4 520 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 PDE5AO76074 875 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 SORBS2O94875 1100 aaKnown RBP12.62□□□□□ -0.39
NPC1-202ENST00000540608 CPA3P15088 417 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 MX2P20592 715 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 ITGAXP20702 1163 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 TYK2P29597 1187 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 MED21Q13503 144 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 CCDC153Q494R4 210 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 LIN52Q52LA3 116 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 VWA5B1Q5TIE3 1220 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 FBXW8Q8N3Y1 598 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 LGMNQ99538 433 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 CENPKQ9BS16 269 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 MFHAS1Q9Y4C4 1052 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 NME7Q9Y5B8 376 aa12.62□□□□□ -0.39
NPC1-202ENST00000540608 F5H423 210 aaPredicted RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 OPHN1O60890 802 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 STK10O94804 968 aaKnown RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 GOT1P17174 413 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 GSTT1P30711 240 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 SCNN1AP37088 669 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 RPL26P61254 145 aaKnown RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms